Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09033 ATGCCGTTAGTGTCAGACTGTCTGGTGGGCCCGTTTTGTGCAGTCATTTTTTTATCCTTTTTTTTATTTTCTTTAATTATAATTTTGTTTTCTTCACCACCATCCTTCACTGCCACCGCCACCGTGAACGCCGGAACAAGCCAGTATGCAGGAGCACCATCACCATTTCGCCCCCACAAGTCACTTTGTTATGTCGACGACAACACATGCATTGTCATGGTTGAACGCGCCACCTCCCTCTTTGAGCTCTCCATGCGCCTCTCCAAAACCTTCCTTAATGGAAGACCCTTCACTCTCAAATACCAGCTCCCAAACGAGGACCCCAATTCCCTCATCTCTGTTACCATCGATGAAGACCTTGAGAACATGATCAAAGAATACGATCAAACTACCTCTGCCAATTCATCCATCAAACCCTCACGTATTTGCCTCTTTCTCTTCCCTTTAAAACCCGATTCCACTCACTCTATTCCACCTCAATTCATCGATACCTCCGCCAAGTCCGATGACTGGTTCCTCGATGCCCTAAACGGTGTCAAATTTCTCAACTTTGGCTTCTCTGATTCCGCCTCTGTTAACTGGTTATTGGATCTTGATGATGACGTTGCAGGAAACAACATCGAGCAAGGTTCCAAGGAGTTTGTGGAGGGTGGTGCTTTCAGCCTGGATCCTTTGGGAATTGTTAGAATTTGA 693 0.4603 MPLVSDCLVGPFCAVIFLSFFLFSLIIILFSSPPSFTATATVNAGTSQYAGAPSPFRPHKSLCYVDDNTCIVMVERATSLFELSMRLSKTFLNGRPFTLKYQLPNEDPNSLISVTIDEDLENMIKEYDQTTSANSSIKPSRICLFLFPLKPDSTHSIPPQFIDTSAKSDDWFLDALNGVKFLNFGFSDSASVNWLLDLDDDVAGNNIEQGSKEFVEGGAFSLDPLGIVRI. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09033 230 Gene3D - 62 145 - -
Seca4g09033 230 SMART PB1_new 57 147 IPR000270 GO:0005515
Seca4g09033 230 SUPERFAMILY CAD & PB1 domains 60 157 - -
Seca4g09033 230 Pfam PB1 domain 61 147 IPR000270 GO:0005515
Seca4g09033 230 PANTHER OS05G0427100 PROTEIN-RELATED 57 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09033 Seca-Chr4 214966772 214967464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09033 61 148 MAP Kinase Kinase Kinase AT1G04700 41.573 4.29e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09033 - - psat:127098305 248.825