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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca4g08995
ATGAGGAAGCCCGAGACATCTAGCAAAAACAACAACAATAACAACAAGCTTAGAAAGGGGTTGTGGTCACCAGAAGAAGATGAAAAGCTCATGAACTATATGCTAAACAATGGACAAGGTTGTTGGAGCGATGTGGCAAGAAATGCTGGCTTGCAAAGGTGTGGCAAAAGTTGTCGGCTTCGATGGATCAATTACTTGAGGCCTGATCTTAAAAGAGGTGCTTTCTCACCCCAAGAAGAGGAACTCATCGTCCATTTGCATTCCCTTCTTGGAAACAGATGGTCTCAAATAGCGGCGCGCTTACCTGGGAGAACTGACAATGAAATAAAAAATTTTTGGAATTCAACAATAAAGAAAAGACTTAAGAACATGTCATCCACAACCACAACAACCTCAACCTCACCAAATGCAAGTGAGTCCTTATCTGAGCCTAATAAAGACCTCAACAACATGCAGCATGGAGGCTTTATGTCTGCACCACATCAAGTACATGTAGCAGCAAGCAGTTACATGCCTATGTTCAGTTCATCTCCATCACCATCAATTCAAACCACAGTTCTCAATACAATGATTGATAGGTTGCCTATGCCAGATTCTGCAGGAGGATACTTCAATGGTACAACCGAGCAATGTTTCTCAGTACTGCATAGTGGGGTTGATTATAACAACAATGGTTCTTATTTAGAAAATGGAGTGTTTGGGAGTGTAAATATTGGAGTTGAAGGGGATATGTTTGTTCCTCCTCTAGAGAATGTTAGCAATAATAATACTACTAACCTGAGAGTGGAGAGTACATGCAAGAAAGAGTTAACTAACAATAGTAATTACTTTGATGACATAAACACCATCCTTAATAACTGTAATATTGGGAACAATAACAGAGCTGAAAATAGGGGTGGGGTAGTAGTTGAAGATTTATTTCAACAACAGTTAACCAATATGGGAGAGTGGGACTTTGAGGACTTGATGAAAGATGTTTCCTCTTTTCCCTTTCTTGATTTTTCATTCTGA
1011
0.3966
MRKPETSSKNNNNNNKLRKGLWSPEEDEKLMNYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIVHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNMSSTTTTTSTSPNASESLSEPNKDLNNMQHGGFMSAPHQVHVAASSYMPMFSSSPSPSIQTTVLNTMIDRLPMPDSAGGYFNGTTEQCFSVLHSGVDYNNNGSYLENGVFGSVNIGVEGDMFVPPLENVSNNNTTNLRVESTCKKELTNNSNYFDDINTILNNCNIGNNNRAENRGGVVVEDLFQQQLTNMGEWDFEDLMKDVSSFPFLDFSF.
337
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca4g08995
336
CDD
SANT
22
66
IPR001005
-
Seca4g08995
336
PANTHER
MYB DOMAIN PROTEIN 55
11
254
-
-
Seca4g08995
336
ProSiteProfiles
Myb-like domain profile.
14
66
IPR001005
-
Seca4g08995
336
SUPERFAMILY
Homeodomain-like
17
113
IPR009057
-
Seca4g08995
336
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
14
66
IPR017930
-
Seca4g08995
336
ProSiteProfiles
Myb-like domain profile.
67
117
IPR001005
-
Seca4g08995
336
Pfam
Myb-like DNA-binding domain
72
115
IPR001005
-
Seca4g08995
336
Pfam
Myb-like DNA-binding domain
19
66
IPR001005
-
Seca4g08995
336
Gene3D
-
74
148
-
-
Seca4g08995
336
MobiDBLite
consensus disorder prediction
1
21
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca4g08995
Seca-Chr4
214449935
214452992
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca4g08995
3
334
MYB Transcription Factor Family
AT3G08500
48.711
3.34e-82
251
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MYB
Seca4g08995
Myb_DNA-binding
1.9e-12
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca4g08995
K09422
-
gmx:100799410
415.616
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