Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08994 ATGGTAAAGATTATTTTATATATACTAGTTGCTGAGAAGTTGTGGTGCATCAGATTCTCTATTTTTGACATGGAGTACTCAGTGGAAGCTTTGGAGAGAGATCTAAAAAATATGAGGAAGTATTATGGGAGTGGAAAAACAAAGGAAGCATCATGGAGAGAATTACAGCTTAAAGGTTTGGATAATTTCCTCATGGAGAAAGAGGAGGAAATCTTAAAGGCCCTCAAGCAGGATTTGGGGAAGCATCATGTTGAGGCTTATAGAGATGAGGTGGGAACGTTAATGAAGTCCTTAGATTTGGCAAGGAAGTCCTTGAAAAAATGGATGGCAAGCAAAGAGGCCAAACTGCCCAAAATAGCATTCCTTTCCAGTGCAGAAATAGTTCCTGAGCCACTTGGTCTTGTCCTCATAATCTCATCATGGAATTTTCCCATTGGACTGTCCTTGGAGCCACTAATTGGAGCTGTAGCTGCTGGAAACAGTGTAGTTTTAAAGCCTTCAGAGATTTCCCCTGCTTGTTCGTCTCTTCTAGCCACTGTCCTCCCTAATTACTTGGACAATAATGGCATTAAGGTCATACAAGGAGGACCAGAAGTGGGCGAACAACTCTTGCAACAAAGATGGGACAAGATCTTCTTCACAGGAAGTGCACGAGTTGGCCGGATTGTTATGTCTGCAGCAGTTGAGCATCTGACGCCTGTGACTTTGGAGTTGGGTGGAAAATGCCCTGCACTGGTTGATTCCCTTTCAGCTTCTTGGGACAGAGAGGTGGCTGTGAAACGGATTTTGGTGTCAAAGTATGGGGCTTGTGCAGGACAAGCATGCATAGCAATCGATTATATCCTTGTAGAAAAGAGTTTCAGTTCTACATTGGTGGAATTAATGAAGGTATGGATTAAGAAAATGTTCGGAGAAAACCCAAAAGCATCTAAGACTATTGCAAGGATAGTTAATAAAAGACATTTATCGAGACTCAAGTGTCTTCTTACTGAGCCTATGGTCAAAGAATCGGTGGTTTTTGGTGGTTACATGGACGAAGATGACTTATTTATGGAACCAACAATATGA 1068 0.4185 MVKIILYILVAEKLWCIRFSIFDMEYSVEALERDLKNMRKYYGSGKTKEASWRELQLKGLDNFLMEKEEEILKALKQDLGKHHVEAYRDEVGTLMKSLDLARKSLKKWMASKEAKLPKIAFLSSAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAVAAGNSVVLKPSEISPACSSLLATVLPNYLDNNGIKVIQGGPEVGEQLLQQRWDKIFFTGSARVGRIVMSAAVEHLTPVTLELGGKCPALVDSLSASWDREVAVKRILVSKYGACAGQACIAIDYILVEKSFSSTLVELMKVWIKKMFGENPKASKTIARIVNKRHLSRLKCLLTEPMVKESVVFGGYMDEDDLFMEPTI. 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08994 355 Coils Coil 65 85 - -
Seca4g08994 355 FunFam Aldehyde dehydrogenase 39 243 - -
Seca4g08994 355 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 240 355 IPR016163 GO:0016620
Seca4g08994 355 Pfam Aldehyde dehydrogenase family 32 355 IPR015590 GO:0016491
Seca4g08994 355 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 39 239 IPR016162 GO:0016491
Seca4g08994 355 SUPERFAMILY ALDH-like 35 355 IPR016161 GO:0016491
Seca4g08994 355 PANTHER ALDEHYDE DEHYDROGENASE 28 355 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08994 Seca-Chr4 214330873 214333391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08994 24 355 Aldehyde Dehydrogenase Gene Family AT4G36250 51.807 3.21e-129 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08994 K00128 - gmx:100819197 561.992