Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08993 ATGACAGAAGAAATCTTTGGCCCCCTGCTTCCAATTATTACTCTGGAGAAGATTGAAGATGGTATTGAATTCATAAACTCAAGGCCTAAACCTCTAGCAATTTACGCCTTCACAAAAGACCAAACTCTGCAGAGAAGGATGGTATCTGAAACATCATCTGGAAGTGTTGTATTCAACGATGCAACTGTGCAATATCTAGCGGATACCCTCCCATTTGGAGGAGTTGGTGAATGTGGATTTGGCAAGTACCATGGGAAGTTCTCATTTGACACGTTCAGTCACCATAAGGCTGTGGCGAGAAGAAGTTTCTATACTGATTTTTGGTTCAGGTTTCCTCCATGGACTCTTAACAAGCTCCAACTACTTGAGGTGGCCTACAATTTAGACTATTTTGGAATACTTCTTGTCCTGCTCGGATTAAAGAGATCAAAGCGCTCATTATTTCAGGCTTGTAATTGA 459 0.4139 MTEEIFGPLLPIITLEKIEDGIEFINSRPKPLAIYAFTKDQTLQRRMVSETSSGSVVFNDATVQYLADTLPFGGVGECGFGKYHGKFSFDTFSHHKAVARRSFYTDFWFRFPPWTLNKLQLLEVAYNLDYFGILLVLLGLKRSKRSLFQACN. 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08993 152 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 78 IPR016163 GO:0016620
Seca4g08993 152 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 79 96 IPR016162 GO:0016491
Seca4g08993 152 SUPERFAMILY ALDH-like 1 122 IPR016161 GO:0016491
Seca4g08993 152 PANTHER ALDEHYDE DEHYDROGENASE 1 134 IPR012394 GO:0006081
Seca4g08993 152 Pfam Aldehyde dehydrogenase family 1 98 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08993 Seca-Chr4 214328586 214330845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08993 1 142 Aldehyde Dehydrogenase Gene Family AT4G36250 57.746 7.09e-57 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08993 K00128 - gmx:100819197 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03774 4 66357507 66361207 Seca4g08993 4 214328586 214330845 PCT