Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08964 ATGGATATAATAGTGTACACTTTCATGTTGTTTACAGGGATAAGCAAAGAAAAGGAGACAGGACAGAGCAAACGTCAAGTTCTTGGAGATATTGGAAATCTTGGAGAACCTTGGAAGGATATTTCTCGACCCCTCCCAAGGAACCATGCAAAACTGTTGGCAAATGCACATGCTTCAGCAAACCTGGTACTCCAAGCTAATGAGCAAGGAGCTGCACAAGGGAATAAAAATGTTATTGTACCTTCACTTGACAATAGAGCACTTGTTCACAAGAAACATGGTGTGGAAGATTTGACTCACAAGCCAAATGTTGAGCCCGTAGATATGGTTAGTTATGAAGCTGGAGAAAAGGCTGATTCTGTTAGTAAAATAATGTCTAGGGAAAGATCTTGTAGGAAGGTCCAGACTCTGACTTCAGCACTTATTACACCAAGCAAGGCTACTCGCGGAATCTTGATTGAGCCAGAAAATCAGCCTGTTGACATTGATGCAGTCTATGCTAATGATGAACCAGAAGTAGCTGAATACCTTGATGATATATACAAATTCTATAAGCTATCAGAAGATAAGAACCAAGTTTCAGATTACATGAGATCACAGCCTGATATTAATGAGAAGATGAGGTTTATTACTGTGGACTGGCTGCTTGATGTGCATAGAAGATTTAAATTAATGCCTGAGACGCTATTTCTCACCATAAACATAATTGATCGGTACCTCTCATTGACAGTTGTACCAAGAACAGAATTACAGTTAGTGGGCATAAGCTCAATGTTCATAGCTAGTAAATATGAAGAAATTAAGCCTCCTCAGGTTAATGACTTTATAGGCATATCAAATAATGCTTACACCAAGAATCAAATCCTTTCCATGGAGAAAGCAATTCTGAATAAGTTAAAATGGTGTTTAACAATTCCCACACCCTATGTCTTTTTGGTTCGACTAATAAGAGCATCTGTTCTACCAGATCCCGAGATGGAGAACTTGGCCTTTTACCTAGCAGAACTTGGTCTTATGCACTATGAGGTCGTTATTTGGAACTACCCTTCAATGATTGCTGCTGCAGCTGTCTATTCTGCTAATTGTACACTCAATAGGCATCCTTTCTGGAGTGAAAATCTACAGCACCAATCTGGTTACTGCACACAACAGATAAAAAATTGTGCAAAGCTACTTGTCTGCTTACACGCCAATGCCAAAGGGAGTAAAATCACAGCGTACTGCAAATTCTCAAGTGAAGACAGAGGGTTTGTTGCTCTTTTATCTCCATCAAAAGAAATATTTAAACATTTGTAG 1296 0.3904 MDIIVYTFMLFTGISKEKETGQSKRQVLGDIGNLGEPWKDISRPLPRNHAKLLANAHASANLVLQANEQGAAQGNKNVIVPSLDNRALVHKKHGVEDLTHKPNVEPVDMVSYEAGEKADSVSKIMSRERSCRKVQTLTSALITPSKATRGILIEPENQPVDIDAVYANDEPEVAEYLDDIYKFYKLSEDKNQVSDYMRSQPDINEKMRFITVDWLLDVHRRFKLMPETLFLTINIIDRYLSLTVVPRTELQLVGISSMFIASKYEEIKPPQVNDFIGISNNAYTKNQILSMEKAILNKLKWCLTIPTPYVFLVRLIRASVLPDPEMENLAFYLAELGLMHYEVVIWNYPSMIAAAAVYSANCTLNRHPFWSENLQHQSGYCTQQIKNCAKLLVCLHANAKGSKITAYCKFSSEDRGFVALLSPSKEIFKHL. 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08964 431 Gene3D - 193 304 - -
Seca4g08964 431 PIRSF Cyclin_A_B_D_E 12 431 IPR046965 GO:0016538|GO:0044772
Seca4g08964 431 PANTHER CYCLINS 138 400 IPR039361 -
Seca4g08964 431 SMART cyclin_7 310 394 IPR013763 -
Seca4g08964 431 SMART cyclin_7 213 297 IPR013763 -
Seca4g08964 431 Pfam Cyclin, C-terminal domain 306 423 IPR004367 -
Seca4g08964 431 Pfam Cyclin, N-terminal domain 179 303 IPR006671 -
Seca4g08964 431 SUPERFAMILY Cyclin-like 307 424 IPR036915 -
Seca4g08964 431 SMART Cyclin_C_2 306 424 IPR004367 -
Seca4g08964 431 Gene3D - 179 419 - -
Seca4g08964 431 SUPERFAMILY Cyclin-like 168 301 IPR036915 -
Seca4g08964 431 FunFam G2/mitotic-specific cyclin 192 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08964 Seca-Chr4 213518903 213521653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08964 21 428 Core Cell Cycle Gene Families AT2G26760 44.254 4.38e-110 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08964 K21777 - qsu:112002888 411.764