Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08949 ATGGATCCAGAAAGATCAATAGAGGAACAATTCTCCAAGCTACACCCTTCCTTGCCAGTAAACACCAGAATTGGAATAGTTGGTGCTGGTCCAAGTGGCATATCAGCTGCTTATGCACTGGCCAGGCTTGGTTATAATAATATCACCATTTTGGAGAAACACCATACAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGACCTGGGTGGACAAGTTCTGGCTGCAAGCAGTGCTCCAGTCATTTTTCACTTGGCAAAAGAGACAGGGTCTACACTAGAAGAAATGGACTCCCATAAACTAGCTGTTATTGACCATTCCTCAGGACAATATGAAGATGTCAAAGTTGTTGATGATTATGTATCTGTTATGTCACTTACACTGGGAATCCAAGAAAAGGTGAAGAATTCTGGTCGGTTTGGAGTACGTGCTGTCAGTGAAATTGCTTCAGACTTAACTCCAGAGTATCTTGAGCATCATGGACTTAAATCAGTTCCTAAATCTGTGGTTTATGGTTACACTGCTTCGGGATTTGGATTTGTTCAAGACATGCCTTATGCCTACATTCATGAATTTACCAGAACCTCCATGGCTGGAAAAATTCGACGATTCAAAAGTGGATATACTAGTCTTTGGCAGAGGCTTGTTGAATCACTTCCTGTAAAACTTCATTGTAATGCTGAAGTGTTGGCAATCAAGCGGAATTCTGACAGTGTCAATATTAATGTCAAGAGCTCAAATGAAATTGAAACTATGGAATTTGATAAGATCATAATCTCTGGTAACTTTCCATTAAAATATGGAAGAACTTATAGATCAGTGCCTTCAAATTGCACAGAGATTGAAACAGAAGTGATGGATGCAAGTGACCTTGAAAAGGAGTTATTCAGCAAAGTAGAGACAATTGATTACTACACCACTGTTTTAAAGATCAAAGGCCTGGAACATATGCCAGTTGGATTTTTTTATTTTAGTGAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCCATGCAGAAGTTTTATGCTGACAGTAACATATTCTTGTTCTGGTCCTATGGCAACTCTGTTGATATTAAGGGACCAACTGTCACTGAGCTTGCAATCAAAGCAATAGAAGCCATGGGGGGAGAGGTTGAGAGTTTTATTCTTCAACGTCGCTTTAAGTATTTTCCTCACATTAGCAGCCAAGATATGAAAAATGGATTCTATGAAAAGTTGGAATCAGAGCTTCAAGGTTCAAGGAATACTTATTATGTTGGTGGGCTTATGGCTTTTGAGCTCACTGAGAGAAATTCATCTTATGCCATGGCTATGATCTGCAAGAACTTTGCAACTAGCAGTGATTTGCCAGTGTTTCCTTATACTAAGAGTTTGTTTCCTTTGCAAACAGAGTTCCAGAGAATGGAGCCTAAAGAACTAGGTGAAATGCCTGGAGTGCAATTTCCCAATTTGCCCACCTTGAATAGCTATTTAAAGCACTGGGGAACTCATCCAGTCACTGAAAACAGAACTCTTTATTCTTGGATAAATGAAGAAGGGACAGTGGTAGGCAACAGGACTTATAGAGAGCAACATTTAAATGCTTCTTGCATTGCACGTAAGCTCTTAACAAGCCAAAAGCCAATTATCAAGCCTGGTGACACGGTTCTACTAGTCTATGTTCCTGGTCTAGATTTCATTGATGCCTTCTTTGGATGCCTAAGAGCTAAAGTTTTACCAGTCCCTGTGCTTCCCCCTGATCCCATGCAAAGAGGTGGACAAGCACTTCTCAAAATTGAGAATATTGCCAAGTCATGTGGCATAGTGGCAATTTTATCAACAGTAGCTTATCACTCAGCAGTCCGTGCAGGTTTAGTGAAAAGTTTTATCTCATTAACTGGGAAAAATGGGAAATCCACAGCTAGATGGCCTAATCTTCCTTGGCTGCACACTGATTCTTGGGTCAATAACTCAAAAAGTTCTGCTATGGAAGATCTTGATGATCAATGTGAATCTCAGCCTGGTGATATATCTTTCTTGCAATTTACCTCAGGTTCAACAGGTGATGCTAAAGGAGTTATGATTACTCATGGGGGGCTTATTCATAATGTGAAGTTGATGAGAAGTAGATACAAGAGCACCTCAAGGACAGTGCTAGTGAGCTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGTGGTGGATCTGCAGTGTTGTTTTCACCAATGACTTTTATCAAGAAACCACTATTGTGGCTTGAAACCATCAGCAAGTATCAAGCAACTCATAGTGCTGGTCCTAACTTTGCTTTTGAGATGGTGGTTAGAAGGTTAGAATCTGAAAAGGATAGGCTTCAGAATTTAGACCTTTCATCCATGGTTTTTCTTATGGTTGCTGCTGAACCAGTAAGGCAGAAGACTCTGAGAAAGTTTCTTGAGCTAACCAGTCCTTTTGGCTTATCTCAAAAGGTGATGGCTCCTGGATATGGCTTAGCAGAAAACTGTGTGTTTGTCAGTTGTGCATTTGGAGAAGGCAATCCTATTCTGGTTGATTGGCAGGGAAGAGTTTGCTGTGGATATATTCACCCAGGGAATGCAGATATTGACATTAGAATAGTTGATCCAGAGCTTGGTGAAGAGCTTAAGGAAGATGGAAGGGAAGGAGAAATCTGGATCAGTAGTCCAAGTTCAGGAATAGGATACTGGGGAAAGGAAGAATTGAGTCAGAAAACTTTCAGAAATGAGCTCAAGAACCATCCTGGACGTATCTACACAAGAACTGGAGACTTGGGAAGAATAATAGATGGAAAGCTATTCATCACTGGAAGAATCAAGGATCTTATCATTGTTGCTGGAAGAAATATCTACTCCTCAGATGTTGAAAAGACAGTTGAGAGTTCATCTGAATTTCTTCGTCCTGGGTGCTGTGCTGTCATTGGTGTCCCTGAGGAAATTTTATCAACAAAAGGGATTTCCTTGCCAGAAGGATCTGACCAGGTTGGCTTGGTTGTGATTGCAGAAATAAGGGATGGTTCTAAACCAGTTAGCAAAGATGTGATTGAGCATATTCAGACTCGTGTAGCAGAAGAACATGGAGTCAATGTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAATGTCTCAAACAGTTCTCAGATGGAACACTGAACTTGGTACCACAACCTATTTTGACAAAGAAATCACTGGTGAGGTCATTTACTACAGGAACATGTAGAGAAGGAAAAACACCCCGGGCTCAGCTAGTGAAAAGCACACCTCTACCTAGTCCAAGAATTAGTAACAAGGAAATTTTGGAATTCTTGAAGAGGCTTATTTCTGAGCAGTCTGGAATCCCAATCAGCAACATCTCAGTCACAGACAACATGTCATCCTATGGAATTGATTCAATTGGTGTGGTTAAAGCAACTCAAAAGCTCTCAGATTTCCTGGGCGTGCCAGTTGCTGCTATAGATGTTTTCAGTGCATCCTGCATTCAAGAATTGGCTAACTTCTCAGAGAATCTTCTATTGAAGTCTCAACCTCAACTTATGAGCAATCCATCCCATGCTCCAGAAGCTGAAATTGATTCTACTGAATTGGTTGTGGATGTGTCCAAGTCTCGCCAATGGGGTATCCATTTACTTCAACTCCTAGCACTTATTTACATTTCTATCATGCTGGTCTCTCCTGCTTATCTATCCATCACTGCTTTTCTAAGTTTCATCCCAAATGTCAGTAAATCAGTATATGGAATTTCATGGACAAACTATCTGATTTCCCTGGCTTTGGCACCCCTTTCTTGGATCCTTTGCATTGCTTCTACTTGCATTTGCATTTCATTTTTTGGGAATTCTTTCTTAAGGCCAAACTATGCCCTTACCCCTGAAGTCTCCATCTATTCAATGGATTTTGTCAAGTGGTGGGCACTTTATAAGACACAGGAAATTTCTTCAAAGGTTCTGGCAATACACCTCAAAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGCTTGGTGCAAGAATAGGATCCTCAGTTTTGCTTGACACAGTTGACATCACAGACCCATCTTTGGTTTCAATTGGAGATGAAGTTGTCATTGCCGAAGGGGTTTTGGTTCAAAGTCATGAGGTGAAGAATGGACTTCTAAGTTTCCTTCCTATTAGGATCAGCAGAAATTCTTCAATCGGACCTTATGCTGTTATTCAAAAAGGAAGTGTTATTAAAGAAGGAGCTGAGGTACAACCCCTGCAAAAGGTTGAAGCAGGCCAACATGTGCTCAAACCTGCCAAGCTTAATAATGTTAAAGAGAATACAGGGCTGCTTGTTACTACCAGCAAAACTCACTCTAATGCTATGTACCACTTTCTGGGGATTTATCTTGTTGGCTTTCTGAGCTCCCTTGCTGCAGCTATTGCTTACTTCCTGTATATAAAGTTCTTGCAGAAACCAGCATCATTCCAACACTTCTCATTTGTTTGCTTATGTGGGGCCTTCCACTGGATCCCATTTACCATTATTGCATATGCTACCATGTTTTCTGATGTCCCATCAAATCCCATTGCCTTTGCCATTTCATTTACATGTGCATACCTGCTTCATGGTCTCATACTCAGCTCACTCACCTTTGCTTTGACTCATATGCTCAAATTCAGTCAAAAGAAAACCCAGTATAAAACCTGGCTTAGCCACCAACTTACCATTTCCTGCCACCTTAGATTTGCAAAGCTTCTGACAGGAACCGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAGCATTGTTCCATTAGAGCCATCAACCCAGTTTCAAACCCAGAGTTAATGTCAATTGGTGATGGTGTCCATCTTGGTGATTTTAGCAGGATCATCACTGGTTTCCATTATTCCGATGGTTATGCTTGTGGAAAAGTAGAGGTTCAGGATAATTCAGTTGTAGGGAGTCAAAGCCTAATTCTCCCTGGTTCTCTTGTAGAAAAGAATGTCATTTTAGGTGCACTCTCAGTTGCTCCAATGAATTCTATACTCCATGAGGGTAGTGTCTACATTGGATCTCAAACCAGAGTTGCTACCAGAAACTCTGGACATGCTTTGGATGAAAGGATAGAGGAGATGGACATGGCATACAAGAAAGTAGTTGGAAATTTGGCTGCAAATTTAGCAGTCACAACTATGAATGCTAAAGCAAGATACTTCCATCGCATTGGTGTTAGTGGAAAAGGGTACTTAAAAATCTATAACAAGCTTGATGGCATGCCACTGCACAAGATTTTTCACCCTGGAAAGAGCTACCCTGTCATGGTAAGGCATAGTAATAGCTTGAGTGCGGATGATGATGCAAGGATTGATGCACGTGGTGCAGCTTTGAAGATACTCTCTGATGCACCTAGTTCTGATTCTTTTCTCTTTGACTTGACACTGAAAACTGGCAATGCATTTTATGCTCGCACTCTTGCTGATTTTGCAAGCTGGCTTGTGTGTGGACTTGCTGCAAGGGAAGAACTAGTCAAGGGTGCCCCACATGTTCGTGAAGCAGTGTGGAATTCCCTTAGACATGCTAACTCTTATGCTGAATTGCATTACTACTCAAACTTTTGCAGGCTCATGCGGTTCCAAGATGGACAAGAAATGTATGTGAAATTCAAGTTAAGGCCTTATGACACAAGTATCAATGAGGACACTGGTAAGGTTAAGCCAACTGGGATTCTTCCACCAGAGACAGGTGCAATTCCTAGAGATGAAAAGGATTCACGTCCTTTGCTTTTCCTTGCTGATGATTTCCAAAACCGTGTGAGTTCCCCTGGTGGAGTTCACTATGTTTTTCAGATGCAACTTCGACCAGTGCCAGATGATGAAGCCACACGTGAAATTGCATTGGATTGTACTAAACCATGGGATGAAAATGAATTTCCTTATATTGATGTTGGAGAGATCAATATCAATGAAAACCTTTCTAAGGAAGAGACAGAGAAGCTTGAGTTTAATCCTTATCTCAGAAGCAATGAGTTAGATGTCATCCCTGCTACTTCCAACACACAAAGTGCTTCAATTGATCATGGCCGTTCATTGATCTATGAGATTTGCCAGCATGTGCGTAATAGACAACCACTCCCAGAAGCTTGGAGGAACCTTGTACAACAATCTAATGTGAAGGTAGACTTGTCCTGTTGTCCAATTGCAGCTGCAACATCATTGCCTGAAAAAGAACCATTGCTGAAAAAAGTGACCTTGACAAGAACATGGTATCAGACCTTCTCAGCAGTCTTCACTCAGCCATTTTTACAAACAGTTTTACCTCACATTCTGGTGGGGTTATCTATTTTTGCTCCTTTGAACTTGGTTTTTTACCTGAAGGATGTCAAGAAACTCCCTTTGCATTGGTTGCATCCATTGTTTTGGGTTCTCTCAGGTGGTGTGGCTGCATTGGCATGTGTTGTAGCCAAATGGGTTCTTGTGGGAAAGAAGAAAAATGGTGAAACAGTACCCATATGGAGCAAAAGGATTGTCATGGATAGCACATGGCAGGCCATTAGAACCTTAATTGGAGATTATTTTATGGACATGGCAAGTGGGTCAGTTTTGTATGTTTTGTGGATGAAGTTGATGGGTGCTGACATAGACATGGATCATGCTGCTTATGTGGATAGCATGGGAGCATTGTTGAACCCTGAAATGGTGAAGATTGAGAGAGGGGGTTGTGTGGGAAGAGAAGCATTGCTATTTGGACATATATATGAAGGTGAAGGAGGGATGGTGAAGTTTGGAGAGATCAAAATTGGTGAAGATGGGTTTGTGGGGAGCAGAGCTGTGGTTATGCCTGGTGTGCAAGTGGAGAATGAGGCCAATCTTTGTGCCTTATCTCTTGCCATGAAAGGAGAAATCGTTAGATCAAGATAA 6969 0.4121 MDPERSIEEQFSKLHPSLPVNTRIGIVGAGPSGISAAYALARLGYNNITILEKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSTLEEMDSHKLAVIDHSSGQYEDVKVVDDYVSVMSLTLGIQEKVKNSGRFGVRAVSEIASDLTPEYLEHHGLKSVPKSVVYGYTASGFGFVQDMPYAYIHEFTRTSMAGKIRRFKSGYTSLWQRLVESLPVKLHCNAEVLAIKRNSDSVNINVKSSNEIETMEFDKIIISGNFPLKYGRTYRSVPSNCTEIETEVMDASDLEKELFSKVETIDYYTTVLKIKGLEHMPVGFFYFSEYMEDPSTIGNPVAMQKFYADSNIFLFWSYGNSVDIKGPTVTELAIKAIEAMGGEVESFILQRRFKYFPHISSQDMKNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMAMICKNFATSSDLPVFPYTKSLFPLQTEFQRMEPKELGEMPGVQFPNLPTLNSYLKHWGTHPVTENRTLYSWINEEGTVVGNRTYREQHLNASCIARKLLTSQKPIIKPGDTVLLVYVPGLDFIDAFFGCLRAKVLPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVAYHSAVRAGLVKSFISLTGKNGKSTARWPNLPWLHTDSWVNNSKSSAMEDLDDQCESQPGDISFLQFTSGSTGDAKGVMITHGGLIHNVKLMRSRYKSTSRTVLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPMTFIKKPLLWLETISKYQATHSAGPNFAFEMVVRRLESEKDRLQNLDLSSMVFLMVAAEPVRQKTLRKFLELTSPFGLSQKVMAPGYGLAENCVFVSCAFGEGNPILVDWQGRVCCGYIHPGNADIDIRIVDPELGEELKEDGREGEIWISSPSSGIGYWGKEELSQKTFRNELKNHPGRIYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSSDVEKTVESSSEFLRPGCCAVIGVPEEILSTKGISLPEGSDQVGLVVIAEIRDGSKPVSKDVIEHIQTRVAEEHGVNVASVKLIKPRTISKTTSGKIKRFECLKQFSDGTLNLVPQPILTKKSLVRSFTTGTCREGKTPRAQLVKSTPLPSPRISNKEILEFLKRLISEQSGIPISNISVTDNMSSYGIDSIGVVKATQKLSDFLGVPVAAIDVFSASCIQELANFSENLLLKSQPQLMSNPSHAPEAEIDSTELVVDVSKSRQWGIHLLQLLALIYISIMLVSPAYLSITAFLSFIPNVSKSVYGISWTNYLISLALAPLSWILCIASTCICISFFGNSFLRPNYALTPEVSIYSMDFVKWWALYKTQEISSKVLAIHLKGTVFLKYWFEMLGARIGSSVLLDTVDITDPSLVSIGDEVVIAEGVLVQSHEVKNGLLSFLPIRISRNSSIGPYAVIQKGSVIKEGAEVQPLQKVEAGQHVLKPAKLNNVKENTGLLVTTSKTHSNAMYHFLGIYLVGFLSSLAAAIAYFLYIKFLQKPASFQHFSFVCLCGAFHWIPFTIIAYATMFSDVPSNPIAFAISFTCAYLLHGLILSSLTFALTHMLKFSQKKTQYKTWLSHQLTISCHLRFAKLLTGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSRIITGFHYSDGYACGKVEVQDNSVVGSQSLILPGSLVEKNVILGALSVAPMNSILHEGSVYIGSQTRVATRNSGHALDERIEEMDMAYKKVVGNLAANLAVTTMNAKARYFHRIGVSGKGYLKIYNKLDGMPLHKIFHPGKSYPVMVRHSNSLSADDDARIDARGAALKILSDAPSSDSFLFDLTLKTGNAFYARTLADFASWLVCGLAAREELVKGAPHVREAVWNSLRHANSYAELHYYSNFCRLMRFQDGQEMYVKFKLRPYDTSINEDTGKVKPTGILPPETGAIPRDEKDSRPLLFLADDFQNRVSSPGGVHYVFQMQLRPVPDDEATREIALDCTKPWDENEFPYIDVGEININENLSKEETEKLEFNPYLRSNELDVIPATSNTQSASIDHGRSLIYEICQHVRNRQPLPEAWRNLVQQSNVKVDLSCCPIAAATSLPEKEPLLKKVTLTRTWYQTFSAVFTQPFLQTVLPHILVGLSIFAPLNLVFYLKDVKKLPLHWLHPLFWVLSGGVAALACVVAKWVLVGKKKNGETVPIWSKRIVMDSTWQAIRTLIGDYFMDMASGSVLYVLWMKLMGADIDMDHAAYVDSMGALLNPEMVKIERGGCVGREALLFGHIYEGEGGMVKFGEIKIGEDGFVGSRAVVMPGVQVENEANLCALSLAMKGEIVRSR. 2323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08949 2322 Gene3D - 303 396 - -
Seca4g08949 2322 CDD FAAL 506 1073 IPR040097 GO:0008610
Seca4g08949 2322 SUPERFAMILY FAD/NAD(P)-binding domain 21 271 IPR036188 -
Seca4g08949 2322 SUPERFAMILY Acetyl-CoA synthetase-like 493 1079 - -
Seca4g08949 2322 Gene3D - 481 952 IPR042099 -
Seca4g08949 2322 Gene3D Hexapeptide repeat proteins 1582 1713 - -
Seca4g08949 2322 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 134 2076 - -
Seca4g08949 2322 Gene3D - 1114 1195 IPR036736 -
Seca4g08949 2322 Pfam AMP-binding enzyme 526 958 IPR000873 -
Seca4g08949 2322 PRINTS Adrenodoxin reductase family signature 23 45 - -
Seca4g08949 2322 PRINTS Adrenodoxin reductase family signature 47 60 - -
Seca4g08949 2322 SUPERFAMILY Trimeric LpxA-like enzymes 1606 1728 IPR011004 -
Seca4g08949 2322 SUPERFAMILY Trimeric LpxA-like enzymes 2181 2315 IPR011004 -
Seca4g08949 2322 ProSiteProfiles Carrier protein (CP) domain profile. 1122 1196 IPR009081 -
Seca4g08949 2322 SMART Phosphopantetheine attachment site 1125 1196 IPR020806 GO:0031177
Seca4g08949 2322 Gene3D - 94 202 - -
Seca4g08949 2322 ProSiteProfiles catalase family profile. 1711 2322 IPR018028 GO:0004096|GO:0006979|GO:0020037
Seca4g08949 2322 SUPERFAMILY Heme-dependent catalase-like 1686 2057 IPR020835 GO:0020037
Seca4g08949 2322 Gene3D - 23 446 IPR036188 -
Seca4g08949 2322 SUPERFAMILY ACP-like 1119 1207 IPR036736 -
Seca4g08949 2322 Gene3D Catalase core domain 1714 2065 - -
Seca4g08949 2322 Pfam Phosphopantetheine attachment site 1127 1191 IPR009081 -
Seca4g08949 2322 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Seca4g08949 2322 SUPERFAMILY Trimeric LpxA-like enzymes 1346 1440 IPR011004 -
Seca4g08949 2322 ProSitePatterns Phosphopantetheine attachment site. 1151 1166 IPR006162 -
Seca4g08949 2322 Gene3D Hexapeptide repeat proteins 1357 1474 - -
Seca4g08949 2322 Gene3D - 953 1081 IPR045851 -
Seca4g08949 2322 ProSitePatterns Putative AMP-binding domain signature. 680 691 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08949 Seca-Chr4 213237326 213246023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08949 676 991 Monolignol Biosynthesis Gene Families AT1G20480 27.445 9.75e-21 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08949 - - pcin:129313184 3713.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03729 4 65294523 65301283 Seca4g08949 4 213237326 213246023 PCT