Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08918 ATGATGGATCACCAATCTGGCCAGCCATTGGATTCAGATGACAGTGACCTTGATATGCAAGCAAAAATTAGTGAGGAATATGAGAAAGTAGAAGATGAGTTTTCAAAAAATTTGGAATTATGTGTAATTAAAGATGAAAAGTTTGTTGAACAACCTGTAGCAGAGACAAAAGCTTCAGAACCATTCATAGGCATGCAGTTCAACTCAAGAGAGGAAGCCAGAGAATTCTACATTGCCTATGGTAGGCGGATAGGATTTACAGTACGGATACACCATAACCGTCGTTCACGAGTAAATAACGAGGTTATTGGTCAAGATTTTGTCTGCTCAAAACAAGGTTTCCGTGCAAAAAAGTATATACACAGAAAAGATAGAGTGCTCCCTCCTCCACAAGCCACCCGAGAAGGTTGTCAGGCCATGATAAGGTTGGCTTTACGGGATAGAGGGATGTGGGTTGTCACCAAATTTGTGAAGGAGCATACTCATAAACTTATGAGTCCCAGTAAAGTTCCATGGCGAGGATCTGGAAAGCACTTGATTAGTGAGGATGAGAAAGATAAGAGAATCTGTGAGCTATCACTTGAGTTGCATAATGAAAGGCAGAAGTGCAAGCGACGTTGTGCTGCATATGAAGAACAGTTAAATATGATTCTGAATGATTTGGAAAAGCACACAGAACACATATCTGAAAAAATTGCTGATGTAGTCCGAAGAATAAGAGAAATTGAGGAGGAAAAATCAGATTCAGATGTCGGGTAA 759 0.4005 MMDHQSGQPLDSDDSDLDMQAKISEEYEKVEDEFSKNLELCVIKDEKFVEQPVAETKASEPFIGMQFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNEVIGQDFVCSKQGFRAKKYIHRKDRVLPPPQATREGCQAMIRLALRDRGMWVVTKFVKEHTHKLMSPSKVPWRGSGKHLISEDEKDKRICELSLELHNERQKCKRRCAAYEEQLNMILNDLEKHTEHISEKIADVVRRIREIEEEKSDSDVG. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08918 252 Coils Coil 193 245 - -
Seca4g08918 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 245 - -
Seca4g08918 252 MobiDBLite consensus disorder prediction 1 22 - -
Seca4g08918 252 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08918 Seca-Chr4 212647714 212649309 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g08918 FAR1 9.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08918 - - gmx:100810283 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08918 4 212647714 212649309 Seca4g08918 4 212647714 212649309 ECH