Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08907 ATGCACGGAATTCACAAAAATAAAAATAATTTGCACAATCACGGACTTCGCTTCCTACGACAATCGAATTTGCGTCAGCCTCAGTTCTCAGTGGAGTTTGGGATTGATGGCTCTGCTCATGGTGAGACTGGGGGAAATGCTACTATGGGAGAGGTCAGTAGCAGCATAGCTGATGAAAACAAAATGGGCTGCAGTTCTTTCGAGCCAACTTATAAACAAGATCAAGATGATAATATAACTCAAGATTCTTCTGGAGCGGACACAATCCCATCAGCAATTCCTGCAGTATCAGTTGTGTCAGCTGATGAACCTTATGTTGGTCAGGAGTTTGATTCAGAAGCTGCAGCGCATGCATTTTATAATGCATATGCTACACGTGTTGGATTCATCATACGTGTAAGTAAGCTCTCACGATCAAGGCGTGATGGAACTGCCATTGGACGGGCTCTTGTTTGCAACAAAGAAGGTTACAGAATGCCTGACAAGCGTGAAAAGATTGTAAGACAAAGGGCAGAGACAAGGGTTGGTTGCCGGGCAATGATTTTAGTGAGGAAAGTAAGTTCGGGTAAATGGGTCGTTACAAAGTTTGTAAAGGAACACACACATCCTCTGACACCTGGAAAGGGTCGAAGGGATTGCATTTATGAGCAATATCCGGTCAGTTCATGTTCTTTCTTTACTGAAAGATTGCATATATGCTTATGTTTATTCAATTAA 717 0.424 MHGIHKNKNNLHNHGLRFLRQSNLRQPQFSVEFGIDGSAHGETGGNATMGEVSSSIADENKMGCSSFEPTYKQDQDDNITQDSSGADTIPSAIPAVSVVSADEPYVGQEFDSEAAAHAFYNAYATRVGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTPGKGRRDCIYEQYPVSSCSFFTERLHICLCLFN. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08907 238 Pfam FAR1 DNA-binding domain 119 205 IPR004330 -
Seca4g08907 238 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 45 208 - -
Seca4g08907 238 MobiDBLite consensus disorder prediction 63 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08907 Seca-Chr4 212523086 212526627 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g08907 FAR1 1.3e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08907 - - gmx:100806900 332.413