Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08890 ATGCTCATTGGTGATGCTCCATTTCCTTCAAGAAATATAGATGATCGTGGATTAGGAATGGAACAAACATATGGAGTTGATCCAGTTATTGATGGAGGTGGTTCTGGTCCAAAGAGTCACCTTGGTCCAGTGGGTACTAGGATCACGGCTACAGTACCTGGTTCAGTGGAACCTGATATTGATCATATTTGGCATGGAATTATTGCAAAAGGAGGAACACCTGTTTGTCATGCTAGATGTGTACCTATCGGGAAAGGGATAGGGACTCAGCTTCCTGATGTCATCGATTGCGCAGCTAGGACAGGATTGGATATGCTCACAAAACACTATGCTGATGCAATTGGTTTTGACGTTGTTTTCTTTCTCCCTGATAGTGAAGAGGATTTTGCTTCATACACAGAATTCCTTTGCTACCTCAAAGTAAAAAACCGTGCCGGGGTTGCCAAGTTTGTTGATAACACCACTTTATTTTTGGTACCTCCATCTGATTCTTGA 495 0.4263 MLIGDAPFPSRNIDDRGLGMEQTYGVDPVIDGGGSGPKSHLGPVGTRITATVPGSVEPDIDHIWHGIIAKGGTPVCHARCVPIGKGIGTQLPDVIDCAARTGLDMLTKHYADAIGFDVVFFLPDSEEDFASYTEFLCYLKVKNRAGVAKFVDNTTLFLVPPSDS. 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08890 164 CDD SPOC_FPA-like 63 164 - -
Seca4g08890 164 Pfam SPOC domain 58 161 IPR012921 -
Seca4g08890 164 PANTHER RNA RECOGNITION MOTIF-CONTAINING 57 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08890 Seca-Chr4 212140176 212141387 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08890 - - gmx:100806555 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03670 4 63425435 63433593 Seca4g08890 4 212140176 212141387 PCT