Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08877 ATGAGGAGAATAATGTGTGTGGCTTTCCCACTAGTAGCTCTTGTAGTGCTGAGCTTGTGTCATGGGATGACAGGTGCAACGGCACCTCCAAGGTCAAAGTTGCAGTGGCATTACTATAAGATGCAAAATACATGCCGCGACGCAGAGGTGTATGTCCGACACCAAGTGAAGCTGCTTTGGGATCATGACAAAACCATTACCGCAAAGCTCCTCCGCCTGGTTTATTCAGACTGTTTTGTCACTGGCTGTGATGCATCAATACTACTTGACGAAGGATCAAAAACAGAAAAGGCAGCACAACAAAACCGGGGGCTTGGGGCATTTGTTTTAATTGACAAGATCAAAGCTGTTCTGGAAGCACGATGCCCTGGAATTGTCTCCTGTGCCGATATACTCCAACTCGCCACCAGGGATGCTGTTCAACTGGTATTCTTTCAACACCCCCTCTTTTCTCTATCTTGA 462 0.4697 MRRIMCVAFPLVALVVLSLCHGMTGATAPPRSKLQWHYYKMQNTCRDAEVYVRHQVKLLWDHDKTITAKLLRLVYSDCFVTGCDASILLDEGSKTEKAAQQNRGLGAFVLIDKIKAVLEARCPGIVSCADILQLATRDAVQLVFFQHPLFSLS. 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08877 153 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g08877 153 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g08877 153 ProSiteProfiles Plant heme peroxidase family profile. 33 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g08877 153 Pfam Peroxidase 52 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g08877 153 Gene3D - 33 150 - -
Seca4g08877 153 PANTHER PEROXIDASE 25-RELATED 16 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g08877 153 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g08877 153 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g08877 153 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g08877 153 SUPERFAMILY Heme-dependent peroxidases 34 143 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08877 Seca-Chr4 211768758 211770475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08877 9 151 Peroxidase AT5G24070 59.184 5.58e-56 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08877 K00430 - gmx:100797875 217.238