Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08876 ATGCAATCAGATGCTGCATCAGTAGACCTGCCATCATCACCATCCATCTCATGGCAGGAAGCTCTAGCATACTTCCAATCGAGGGGCTTGGATGTACTTGACATGACAACACTCTTAGGAGCACACACAATGGGCCAAACACATTGTAGCTACATTGTTGATCGGCTGTATAATTACAATGGTACTAGAAACGCAGACCCTAGCATGAATGCTACTTTTGTAGACACAATGAAAAATCTTTGCCCGCCAAGAAAGAAAGGGCAACATGATTCACTGGTATATCTAAACCCAGAATCTGGATCAAAATACAAGTTCACAGAATCATACTACGAAAGGATCCTACGCCATGAAGCTGTACTAGGAATTGATCAACAATTCCTATATGGTGATGACACTGAACAAATCACTGAGGAATTTGCTGCTGGATTGGAAGATTTTCGGAGATCTTTTGCTCTATCAATGTACAAGATGGGGAATATCAAAGTCTTAACAGGAAACCAAGGAGAGATACGCCGGAATTGTCGATATACAAATAAGGGCAACCCAAATTAG 552 0.4149 MQSDAASVDLPSSPSISWQEALAYFQSRGLDVLDMTTLLGAHTMGQTHCSYIVDRLYNYNGTRNADPSMNATFVDTMKNLCPPRKKGQHDSLVYLNPESGSKYKFTESYYERILRHEAVLGIDQQFLYGDDTEQITEEFAAGLEDFRRSFALSMYKMGNIKVLTGNQGEIRRNCRYTNKGNPN. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08876 183 Gene3D Peroxidase, domain 2 11 157 - -
Seca4g08876 183 PANTHER PEROXIDASE 25-RELATED 6 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g08876 183 FunFam Peroxidase 12 157 - -
Seca4g08876 183 ProSitePatterns Peroxidases proximal heme-ligand signature. 34 44 IPR019793 -
Seca4g08876 183 Pfam Peroxidase 2 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g08876 183 ProSiteProfiles Plant heme peroxidase family profile. 13 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g08876 183 SUPERFAMILY Heme-dependent peroxidases 12 178 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca4g08876 183 Gene3D - 4 178 - -
Seca4g08876 183 PRINTS Plant peroxidase signature 152 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g08876 183 PRINTS Plant peroxidase signature 33 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g08876 183 PRINTS Plant peroxidase signature 96 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08876 Seca-Chr4 211767734 211768593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08876 4 178 Peroxidase AT5G24070 65.341 1.47e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08876 K00430 - gmx:100797875 289.271