Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08855 ATGGCGTACCAGACCCCCGATCACGAATCAGGTTCCGAACCCAACACCCAAACACGCCTCTACAACCCCTACAAGGACCTCGAGGTCCCCATTCGAAACCTCTACCAGCTCCCAACCTCCCCCGAATACCTCTTCGTCGAGGAGGCTCGCCGCAAACGTCGATCTTGGGGCGAGAATCTCACCTTCTACACCGGCTGCGGCTACCTCGCCGGTGCCGTTGGCGGTGCTGCCGTCGGACTCGTCGACGGCGTCAAATCCTTCGAGTCCGGCGACACCGCCAAGCTCCGAATCAACCGGGTACTTAACTCGTCCGGTCACTCTGGTCGGGCGTGGGGTAATCGTTTGGGCGTGATCGGGTTGCTTTACGCCGGTATAGAGAGCGGGATTGTGGCGGTGAGAGACACTGATGATGTGTGGAACAGCGTGGCAGCAGGGCTCGGCACTGGCGCATTGTATCGAGCGGCGAGAGGAGTGAGATCCGCGGCGGTGGCGGGTGCTGTTGGTGGAGTTGTGGTTGGAGTGGCTGTCACGGCGAAGCAGGCATTGAAACGTTACGTACCTATATGA 567 0.6014 MAYQTPDHESGSEPNTQTRLYNPYKDLEVPIRNLYQLPTSPEYLFVEEARRKRRSWGENLTFYTGCGYLAGAVGGAAVGLVDGVKSFESGDTAKLRINRVLNSSGHSGRAWGNRLGVIGLLYAGIESGIVAVRDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGVAVTAKQALKRYVPI. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08855 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 171 - -
Seca4g08855 188 PANTHER TIM23 30 177 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08855 Seca-Chr4 211312540 211313106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08855 7 188 Chloroplast and Mitochondria Gene Families AT1G72750 70.811 1.53e-81 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08855 K17794 - gmx:100813158 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11724 4 257503167 257503733 Seca4g08855 4 211312540 211313106 PCT