Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08801 AGAATTGTTGATTGGCTGGCTGCAGACTTCAAGAGAAATGAAGGCATTGACCTTTTGAAAGACAAACAAGCTCTTCAGCGTCTCACCGAGACAGCTGAGAAAGCAAAGATGGAGCTGTCATCATTGACTCAAACAAACATCAGTTTGCCATTCATAACTGCTGCAGCAGATGGCCCCAAGCACATCGAGACCACCCTTACCAGGGTTAAATTCGAGGAATTATGTTCAGATCTCCTTGACAGGCTGAGGACACCTGTGGAAAATTCATTGAGGGATGCAAAACTCTCGTTTAAGGATCTTGATGAGGTGATACTTGCGGGTGGATCAACACGTATCCCTGCTGTTCAGGAGCTTGTAAAGAAGATGACTGGGAAGGACCCAAATATCACTGTCAATCCGGATGAAGTGGCAGTTCAGGTTGGATTAGCTATTTTCATTGAGCTGATAGAGAAGGACCCGGAAGCTGCAATTGTATTATTTTGGAAAGCAATAAATTCAAGGGACAAAGTGGATAGTACGATAAAGGATATGGCGGTGGTGATGAAGCAATTAGACAGATCTGAAGAAGCCATTGAAGCAATCTGTTCATTTAGAGGCCTTTGCTCCAAACAATCCCAAGAGTCCCTTGATAATGTACTAATAGATCTTTACAAGTCACAATCTAAACATAGTAAGAAAATACTTGGATTACATTCAAATGTTTGTCCATTCACAAAGACAGCACGGTCTCATGGAAAAAAGTTCCAAGTTTCTATTAAACAAGAAACTTCAAGATTACTGGTATTTGATCTTAACTAA 798 0.4098 RIVDWLAADFKRNEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITAAADGPKHIETTLTRVKFEELCSDLLDRLRTPVENSLRDAKLSFKDLDEVILAGGSTRIPAVQELVKKMTGKDPNITVNPDEVAVQVGLAIFIELIEKDPEAAIVLFWKAINSRDKVDSTIKDMAVVMKQLDRSEEAIEAICSFRGLCSKQSQESLDNVLIDLYKSQSKHSKKILGLHSNVCPFTKTARSHGKKFQVSIKQETSRLLVFDLN. 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08801 265 Coils Coil 18 45 - -
Seca4g08801 265 PANTHER PROTEIN POLLENLESS 3-LIKE 2 147 260 IPR044961 -
Seca4g08801 265 Gene3D Actin; Chain A, domain 4 1 82 - -
Seca4g08801 265 FunFam Molecular chaperone DnaK 1 82 - -
Seca4g08801 265 Gene3D - 133 143 - -
Seca4g08801 265 Pfam Hsp70 protein 1 147 IPR013126 GO:0005524|GO:0140662
Seca4g08801 265 Gene3D - 83 132 - -
Seca4g08801 265 SUPERFAMILY Actin-like ATPase domain 1 145 IPR043129 -
Seca4g08801 265 ProSitePatterns Heat shock hsp70 proteins family signature 3. 103 117 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08801 Seca-Chr4 210018326 210021460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08801 1 144 Calmodulin-binding Proteins AT5G02500 40.690 4.82e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08801 K03283 - pvy:116128933 259.996