Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08788 ATGGAAATGGACAATCTTTGGATTTTGTTTATGACAACAGCATTTCTCTTGTCCACTCTGATCCTCATCCTGTACACCAACAACAGGAGGTTTACACTCAAAACCAAACACATAAAAAAACTTCCTTTAGGCACTTTTGGTTGGCCTTTTATCGGTGAAACCATTCAGTTTGTTTCTTCTGCTTACTCTGATCGCCCTGAGACCTTCATGGACAAGCGACGCCTCATGTATGGGAAGGTGTTTAAGTCACACATATTTGGAAGCCCTTCTATTGTTTCTACTGATGCAGATGTTAATAAGTTTATTTTGCAAAGTGATGCAAAGGTTTTTGTTCCTTCTTATCCCAAGTCTCTGACTGAGTTGATGGGGGAGTCTTCTATTTTGCTCATCAATGGAAGCTTACAGAGAAGAATACATGGACTAGTTGGAGCTTTCTTCAAGTCTCCACAGCTTAAGGCTCAGATCACCAGAGACATGCAGAAGTATGTGCAAGAATCAATGGCAAATTGGAAGGAGGACAAACCTGTATACATACAAGATGAAACAAAAAATATTGCCTTTCAAGTACTAGTCAAGGCATTGATTAGTTTGAATCCAAGTGAAGAAATGGAGCTTCTGAAGAAACATTTCCAGGAATTCATCTCTGGCCTCATGTCTTTACCCATAAACCTGCCAGGAACTAGACTTTACCAATCCTTACAGGCAAGTCCTGCAAAAAAGAAAATGGTCAAATTAGTGAAGAGAGTTATTCAAACTAGAAGAAATAGTGGCATCTCTAAAGTTCCAAAAGATGTAGTGGATGTGCTTCTGAATGATGCAAGTGAGCAATTAACTGATGATTTAATAGCAGATAATATGATAGATATGATGATTCCAGGAGAGGACTCGGTGCCAGTTCTTATGACTCTTGCTATTAAGTATCTATCAGAATGCCCTGCTGCTTTGCAACAATTCACGGAGGAAAATGTGAAGCTTAAAAAACTCAAAGATCAACTCGGGGAGCCCTTGTGTTGGAAAGATTACTTATCATTACCATTTACTCAAACAGTTATCACAGAAACTTTAAGGATGGGGAATATAATAATTGGAGTTATGCGAAAGGCCATGAAAGATGTTGAAATAAAAGGGTACTTAATACCAAAAGGATGGTGTGTATTTGCATATTTTAGATCAGTTCATCTAGATGACCAAAATTTTGACCAGCCTTACCAATTCAATCCATGGAGGTGGCAATTAGTGTTATTTATTAAGATTTTAAATGATAAATTGGGGGGATCACAGGACAAAGACATGAGCAGTTGTAATTTCACTCCATTTGGAGGGGGGCAAAGGCTTTGCCCTGGCCTTGACTTGGCCAGGCTAGAGGCTTCTATCTTCCTACACCACTTTGTTACTCAATTCAGGTGGTATGCTGAAAAAGATACAATTGTGAACTTCCCCACTGTAAGAATGAAAAGGAGGATGCCAATCTTTGTAAGGAGAGTGGAATCTTGA 1494 0.3896 MEMDNLWILFMTTAFLLSTLILILYTNNRRFTLKTKHIKKLPLGTFGWPFIGETIQFVSSAYSDRPETFMDKRRLMYGKVFKSHIFGSPSIVSTDADVNKFILQSDAKVFVPSYPKSLTELMGESSILLINGSLQRRIHGLVGAFFKSPQLKAQITRDMQKYVQESMANWKEDKPVYIQDETKNIAFQVLVKALISLNPSEEMELLKKHFQEFISGLMSLPINLPGTRLYQSLQASPAKKKMVKLVKRVIQTRRNSGISKVPKDVVDVLLNDASEQLTDDLIADNMIDMMIPGEDSVPVLMTLAIKYLSECPAALQQFTEENVKLKKLKDQLGEPLCWKDYLSLPFTQTVITETLRMGNIIIGVMRKAMKDVEIKGYLIPKGWCVFAYFRSVHLDDQNFDQPYQFNPWRWQLVLFIKILNDKLGGSQDKDMSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWYAEKDTIVNFPTVRMKRRMPIFVRRVES. 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08788 497 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 32 495 - -
Seca4g08788 497 SUPERFAMILY Cytochrome P450 39 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08788 497 CDD CYP90-like 73 494 - -
Seca4g08788 497 Pfam Cytochrome P450 44 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08788 497 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08788 497 PRINTS P450 superfamily signature 147 160 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08788 497 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08788 497 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08788 497 PRINTS E-class P450 group IV signature 41 58 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08788 497 PRINTS E-class P450 group IV signature 430 446 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08788 497 PRINTS E-class P450 group IV signature 446 464 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08788 497 PRINTS E-class P450 group IV signature 393 411 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08788 497 PRINTS E-class P450 group IV signature 344 360 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08788 497 PANTHER CYTOCHROME P450 26 39 470 - -
Seca4g08788 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Seca4g08788 497 Gene3D Cytochrome P450 32 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08788 Seca-Chr4 209423283 209427827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08788 28 468 Cytochrome P450 AT3G13730 65.247 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08788 K12638 - gmx:100797868 797.734