Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08781 ATGGAGGAAACACCTAAGCTTATCCATGGAACAATTGAAGCTACCATCTTCAATGCCACACCTTACTCACCTTCATTTCCCTTCAATTGTTTATTTACAAATGGAAGGCCTGCTTATGTGACTATCAAGATAAACGACAAGAAAGTGGCTAAAACGACCCTAGAACGTGAACGTGTATGGAACCAAACCTTTCAGATTCAGTGTGCTCATCCAGCTGATTCATCTATCACCATTACACTGAAAACTTCATGTTCCACATTGGGGAAGTTTCATATCCAGGCCAAGCAGTTGAAGGAAGAAAGTTTGATCAATGGTTTCTTCCCTCTCCTCATGGAAAATGGAAAACCAAATTCAGAACTAAAATTAAGGTTCATATTATGGTTCAAGCCAGCATATTTGGAACCAAGTTGGGCAAAGCTACTGAGTAATGGGGAATTTCAAGGGCTGAGGGATGCTACTTTCCCACAAAGGTCCAATTGTCAGGTTAAGCTCTATCATGATGCTCATCATTCATCTGCTTTCCAACCTCCTTTTGATCTATGTGGTACTCCAAGAAAGCTTTGGGAGGATGTCTATAAAGCCATTGAGGGTGCAAAATATTTAGTTTATATTGCAGGCTGGTCCTTCAATCCCAAGATGGTTCTGGTAAATATATGA 657 0.4033 MEETPKLIHGTIEATIFNATPYSPSFPFNCLFTNGRPAYVTIKINDKKVAKTTLERERVWNQTFQIQCAHPADSSITITLKTSCSTLGKFHIQAKQLKEESLINGFFPLLMENGKPNSELKLRFILWFKPAYLEPSWAKLLSNGEFQGLRDATFPQRSNCQVKLYHDAHHSSAFQPPFDLCGTPRKLWEDVYKAIEGAKYLVYIAGWSFNPKMVLVNI. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08781 218 Pfam C2 domain 38 109 IPR000008 -
Seca4g08781 218 PANTHER PHOSPHOLIPASE D 8 216 IPR015679 -
Seca4g08781 218 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 125 IPR035892 -
Seca4g08781 218 Gene3D C2 domain 10 131 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08781 Seca-Chr4 209359049 209360120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08781 30 216 Phospholipase D Gene Family (Wang group) AT1G55180 59.162 2.50e-76 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08781 K01115 - gmx:100807431 401.364