Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g08773 | ATGAGTCGAGAACAACAAAAGCGAGGGAAGCAGGAAAAAGGTTCTGATGGTGCTGAGAAGGTTATTGTTGCCGTCAAGGCTTCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCTCTGACTCATGTTGTTCAACCTGGGGATTGCATTACACTGCTAGTGGTTGTACCCCCACAAAGTTCAGGCCGAAGACTGTGGGGTTTTCCAAGGTTTGCTGGTGACTGTGCCAATAGTCACAAGAAGTCGACTCCAGGAACAACAAGTTCAGAACAGAAGAATGATATCACTGATTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCTAATAAGATAAATGTCAAGATTAAAATTGTTTCTGGATCACCCTGCGGATCAGTGGCTACAGAGGCCAAGAAAGCCCAGGCCAATTGGGTTGTATTAGACAAACAGCTCAAACATGAGGAAAAACAGTGCATGGAAGAGCTGCAGTGCAACATTGTGGCTATGAAGCGTTCCCAGCCTAAGGTACTTCGCTTGAATTTGGTTGGATCAAAGAACAAGGATCTTGAAGAAGCTTGTCCATTACCTTCTGATCAAGGTGAGATGCCTGGAAAACAGACCAAAAAGAAGAACGATACTTTAAATTCCATAAAAGGACCAGTTGTCACTCCCACTAGCAGCCCCGAGCTAGGGACCCCGTTTACTGCAACTGAAGCTGGTACCTCATCAGTTTCAAGCTCTGATCCAGGAACTTCACCATTTTTTATCTCTGAGATGAATGCTGAGTCAAAGAAAGAGGAAACCATCAAAGAAAATCAAGAACTCGATGATACTATTTCAGACACAGACAGTGAGCATTTGTCCTCATCTTCAGCAAGCTTGAGATTCCAGCCATGGATCACAGATTTACTTTTACATCAACAATCATCTCAACATACAGAAGAAAGATCAGAGAGATCTCATAATAGGCTTCAATCGTCTACAACTAGAGCTTTGCTAGAGAAATTCTCAAGGCTTGATAGAGAAGCTGAAATTGAAATTTCAAACTACAAGACTGACTTGGATTTTGGTGGAAATGTAAGAGACGCAATAGCATTATCTAGAAATGCTCCGCCAGGTCCCCCTCCGTTATGTTCAGTGTGTCAACACAAGGCTCCTGTTTTTGGAAAGCCTCCAAGATGGTTCAGCTATGCTGAGTTGGAGCTTGCCACTGGTGGATTTTCACAAGCCAATTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTACCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATGTTGAATTTTGCTCGGAGGTAGAAGTCCTGAGCTGTGCTCAGCACCGAAATGTGGTTATGTTGATTGGGTTCTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAGTACATATGTAATGGATCATTGGATTCTCATTTATATGGGAGACAACGGAAACCATTAGAATGGTCCGCACGGCAAAAAGTCGCTGTTGGAGCTGCTCGAGGGTTGAGATATCTTCATGAAGAGTGCAGGGTGGGTTGCATTATCCACCGTGACATGAGGCCTAACAACATTCTCATCACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACAGGAGTGGAAACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATAACTGAAAAGGCTGATGTTTATTCCTTTGGGGTGGTATTAGTGGAGCTTGTTACAGGGCGAAAAGCTGTGGATCTCAATCGACCCAAGGGACAACAGTGTCTTACTGAGTGGGCACGGCCACTGTTAGAAGAATATGCCATTGAGGAGCTGATTGATCCAAGGATGGGAAGTCACTACTCAGAGCATGAGGTCTCTTGCATGCTACATGCTGCATCATTATGCTTAAGGCGAGATCCTTATTGTAGACCACGCATGTCACAGGTTCTTCGAATACTAGAGGGTGACATGGTCATGGACTCAAATTGCATTTCAACTCCTGGTTATGATGTGGGCAACCGGAGTGGTTGA | 2094 | 0.4417 | MSREQQKRGKQEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPPQSSGRRLWGFPRFAGDCANSHKKSTPGTTSSEQKNDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGSVATEAKKAQANWVVLDKQLKHEEKQCMEELQCNIVAMKRSQPKVLRLNLVGSKNKDLEEACPLPSDQGEMPGKQTKKKNDTLNSIKGPVVTPTSSPELGTPFTATEAGTSSVSSSDPGTSPFFISEMNAESKKEETIKENQELDDTISDTDSEHLSSSSASLRFQPWITDLLLHQQSSQHTEERSERSHNRLQSSTTRALLEKFSRLDREAEIEISNYKTDLDFGGNVRDAIALSRNAPPGPPPLCSVCQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRKPLEWSARQKVAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIEELIDPRMGSHYSEHEVSCMLHAASLCLRRDPYCRPRMSQVLRILEGDMVMDSNCISTPGYDVGNRSG. | 698 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g08773 | 697 | MobiDBLite | consensus disorder prediction | 304 | 324 | - | - | |
Seca4g08773 | 697 | PANTHER | OS01G0750732 PROTEIN | 154 | 681 | - | - | |
Seca4g08773 | 697 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 480 | 683 | - | - | |
Seca4g08773 | 697 | MobiDBLite | consensus disorder prediction | 188 | 287 | - | - | |
Seca4g08773 | 697 | Gene3D | Transferase(Phosphotransferase) domain 1 | 480 | 685 | - | - | |
Seca4g08773 | 697 | SUPERFAMILY | Protein kinase-like (PK-like) | 388 | 678 | IPR011009 | - | |
Seca4g08773 | 697 | Gene3D | Phosphorylase Kinase; domain 1 | 375 | 479 | - | - | |
Seca4g08773 | 697 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 376 | 479 | - | - | |
Seca4g08773 | 697 | ProSiteProfiles | Protein kinase domain profile. | 404 | 680 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g08773 | 697 | MobiDBLite | consensus disorder prediction | 306 | 320 | - | - | |
Seca4g08773 | 697 | MobiDBLite | consensus disorder prediction | 257 | 280 | - | - | |
Seca4g08773 | 697 | Coils | Coil | 255 | 275 | - | - | |
Seca4g08773 | 697 | FunFam | Dual-specific kinase DSK1-like | 12 | 167 | - | - | |
Seca4g08773 | 697 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 525 | 537 | IPR008266 | GO:0004672|GO:0006468 | |
Seca4g08773 | 697 | MobiDBLite | consensus disorder prediction | 210 | 255 | - | - | |
Seca4g08773 | 697 | CDD | STKc_IRAK | 410 | 676 | - | - | |
Seca4g08773 | 697 | Pfam | Protein kinase domain | 408 | 671 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g08773 | Seca-Chr4 | 209239640 | 209245753 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g08773 | 384 | 693 | Trihelix Transcription Factor Family | AT1G70460 | 51.562 | 4.99e-101 | 323 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_PERK-2 | Seca4g08773 | Pkinase | 1e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g08773 | - | - | gmx:100789216 | 1289.63 |