Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08735 ATGGACATCAATAGCAAACAAGCACTTGTTGTGATCTTTGCATTTGTCTTCTTGGCATGGGGGAATGGACAAGATACCCTTGTGCCAGCAATCATAACATTTGGTGACTCTGCTGTGGATGTGGGGAATAATGACTATCTGCCCACTCTTTTTAAGGCTGACTACCCTCCTTATGGAAGGGACTTTCTCAACCATAAACCCACTGGTAGGTTTTGCAATGGGAAATTAGCTACTGATATTACTGCTGAAACACTGGGTTTTAAGAGTTATTCACCTGCATATCTTAGCCCTCAGGCATCAGGGAAGAACCTACTTATTGGTGCGAATTTTGCTTCAGCTGCCTCTGGATATGATGAAAAGGCTGCTATTTTGAATCATGCAATCCCATTGTTCCAACAATTAAAATATTACAAGGAATACCAAGGCAAACTGGCCAAGGTAGCTGGAAGTAAAAAGGCAGCATCAATTGTTAAGGATGCATTGTACATTTTGAGTGCTGGCAGTAGTGACTTTGTGCAAAACTATTACGTCAATCCTTTGATCAACAAAGTCATAACTCCTGATCAGTATTCAGCATACCTTGTGGATGCATTCTCAAGCTTTGTTAAGGACTTGTATAGATTGGGAGCCAGAAAAGTTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGAACTTTATTTGGATTCTATGAGAATGGTTGTGTCTCAAGAATCAACAATGATGCCCAAGGATTTAACAAAAAGATCAACTCAGCTGCAACAAACCTCCAAAAGCAACTTCCTGGTCTTAAGATTGTTGTCTTTAATATTTTCAAACCTCTCTATGACCTTGTACAATCCCCTTCAAAATTCGGTTTTGTGGAAGCAAGGAGAGGTTGCTGTGGTACTGGAACTGTGGAGACAACATCCTTATTGTGCAATCCAAAATCACTAGGAACTTGTTCTAATGCAACTCAGTATGTGTTTTGGGACAGTGTCCATCCTTCACAAGCTGCTAACCAAGTTCTAGCTGATGCATTGATTCTACAAGGCATAGCCCTTATCAGTTAA 1062 0.4105 MDINSKQALVVIFAFVFLAWGNGQDTLVPAIITFGDSAVDVGNNDYLPTLFKADYPPYGRDFLNHKPTGRFCNGKLATDITAETLGFKSYSPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLFQQLKYYKEYQGKLAKVAGSKKAASIVKDALYILSAGSSDFVQNYYVNPLINKVITPDQYSAYLVDAFSSFVKDLYRLGARKVGVTSLPPLGCLPAARTLFGFYENGCVSRINNDAQGFNKKINSAATNLQKQLPGLKIVVFNIFKPLYDLVQSPSKFGFVEARRGCCGTGTVETTSLLCNPKSLGTCSNATQYVFWDSVHPSQAANQVLADALILQGIALIS. 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08735 353 Gene3D SGNH hydrolase 23 348 IPR036514 -
Seca4g08735 353 FunFam GDSL esterase/lipase APG 21 349 - -
Seca4g08735 353 SUPERFAMILY SGNH hydrolase 121 344 - -
Seca4g08735 353 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Seca4g08735 353 PANTHER GDSL ESTERASE/LIPASE EXL3 14 344 - -
Seca4g08735 353 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08735 Seca-Chr4 207989651 207992099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08735 29 345 Pollen Coat Proteome AT1G75910 34.375 4.88e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08735 - - gmx:100795716 650.973