Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08690 ATGGCATCCCTTTTGGTCGTCCTATGTACTTTTGCCATCATTTTGTTGGCTACTTCTGTTGAAGCTTCCAGGCAATTCAAAGTTGGTGATCATTTTGGTTGGCAACAACCTGCTCCCAACGATACTGCATTTTATATCCAATGGGCTGAAAGGAACCGATTTCAAATTGGAGATTCTCTAGTTTTTGAGTACCAGAATGACTCGGTACTTACTGTGGAGAAATTGGATTACTTTAATTGTGACTCAAGTGACCCCATCACTGCCTTTGACAATGGGAAGAGCACTCTTAATCTTGACAGATCTGGGGCCTTCTATTTCATCAGTGGAACTGATGATCACTGCAGAAACGGGCAAAAATTACTTGTGGAGGTGATGTCCCCACATCCAATTCGAGAATCTCCACCATCCATTTCTCTTGCACCTGAAGGCATCCCAACGATGGCTCCTACACCTTCTGAATCATCTGATGATAGCTTAGAGGTTTCTGCCTCAGTGGTGCCTAGTTCAATTTTTATGTCCCCTTTGGTCACATTTGTAATTGTGATACTGTTAGCAGTAGCACTCTGA 567 0.4303 MASLLVVLCTFAIILLATSVEASRQFKVGDHFGWQQPAPNDTAFYIQWAERNRFQIGDSLVFEYQNDSVLTVEKLDYFNCDSSDPITAFDNGKSTLNLDRSGAFYFISGTDDHCRNGQKLLVEVMSPHPIRESPPSISLAPEGIPTMAPTPSESSDDSLEVSASVVPSSIFMSPLVTFVIVILLAVAL. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08690 188 Gene3D - 23 133 IPR008972 -
Seca4g08690 188 PANTHER BLUE COPPER PROTEIN 20 148 IPR039391 GO:0009055
Seca4g08690 188 FunFam Early nodulin-like protein 1 23 129 - -
Seca4g08690 188 SUPERFAMILY Cupredoxins 23 125 IPR008972 -
Seca4g08690 188 MobiDBLite consensus disorder prediction 130 158 - -
Seca4g08690 188 ProSiteProfiles Phytocyanin domain profile. 24 126 IPR003245 GO:0009055
Seca4g08690 188 Pfam Plastocyanin-like domain 39 118 IPR003245 GO:0009055
Seca4g08690 188 CDD OsENODL1_like 24 125 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08690 Seca-Chr4 206822556 206823574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08690 2 138 Phytocyanin Superfamily AT1G79800 51.773 1.08e-50 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08690 - - gmx:102664880 236.884