Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08594 ATGTCACGTATTAGCAAGGTCATAGTAGGCCTCATGCCTGCGATTTTAATGGTGTTGGTTCAAGTTGCTTATACTGTGTCTATGATATTGTACAAGTTGGTTGAAAATGATGGAATGAGCTTGAAAGTCCTTATCGCCTATCGCTTCCTCTTTGCATCAGTTTTCTTGGTTCCTCTTGCTTACTTCATGGAAAGGAAGAGCAAGCCGGAGATTACAGCGGAAGTACTTTTCCAAGCATTTCTTTGTGGATTATTTGGGGCATCCTTACAACAAAATTTGTTCATGGAAGCAATGGTTTTGGCAGGTGCAACATATGCTACGGCCATGTACAATCTCATTCCTGGTTTTACCTTTATCTTAGCCGTATGTTTTAGATTGGAAAGGTTGAAAATTGGAACATTAGTAGGGAAGGCCAAAGTACTTGGCACTTTGATGGGAATTGGTGGATCCATGATGCTTACCTTCTATAAGAGCACCGAGATTCACATCTGGTCAACACATATAAATCTAGTGAAACATCTTCATACAAAAAATGTGCCTACCACTTATGCTTGGGGATCCTTTCTTGCTTTTGGCACTTGTGTATCATTTTCCGTATGGTTGATTATTCAGGCTAGGATGAGTGAGAAGTTTCCTTGGCATTATACAAGTGCAGCTTTGATGTCAGTGATGGCTTCCATTCAATCAATTATATTTGCTCTATGCATGGAAAGAGATCATTGGAATCAATGGAAGCTTGGTTGGAACATTAGGCTTCTCACTGCAGTTTACACGGGTGTTCTGTCCTCTGGAGTAGTTTGGGTTCTTATTTCATGGTGCATACGCATAAAAGGCCCACTTTATGTTTCAATTTTCAACCCCCTCTTCCTTGTTCTAGTGGCCATTGCAGGGTCTCTACTATTAGATGAAAGGCTTTATGTGGGAAGTGTAATAGGATTACTTTTTATTGTGTTCGGGCTATACATTGTCTTGTGGGGTAAAGGTAAAAAATTAAAGAGAACTCCAGAGCAAGAGCAAAAGCTAACAAAAGGCTCACTGGAAGTTGAACCATTGGAGATAATTGTCACAAAGGAGACAGATGGTAAAAGTGTTGATGATAATAATGACATAAAGTCTGGCATTACTATTCCGTCTAGCTTGTCGATGGAAAATGATCATTTGTAA 1164 0.3969 MSRISKVIVGLMPAILMVLVQVAYTVSMILYKLVENDGMSLKVLIAYRFLFASVFLVPLAYFMERKSKPEITAEVLFQAFLCGLFGASLQQNLFMEAMVLAGATYATAMYNLIPGFTFILAVCFRLERLKIGTLVGKAKVLGTLMGIGGSMMLTFYKSTEIHIWSTHINLVKHLHTKNVPTTYAWGSFLAFGTCVSFSVWLIIQARMSEKFPWHYTSAALMSVMASIQSIIFALCMERDHWNQWKLGWNIRLLTAVYTGVLSSGVVWVLISWCIRIKGPLYVSIFNPLFLVLVAIAGSLLLDERLYVGSVIGLLFIVFGLYIVLWGKGKKLKRTPEQEQKLTKGSLEVEPLEIIVTKETDGKSVDDNNDIKSGITIPSSLSMENDHL. 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08594 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 329 - -
Seca4g08594 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Seca4g08594 387 PANTHER WAT1-RELATED PROTEIN 12 331 IPR030184 GO:0016020|GO:0022857
Seca4g08594 387 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020
Seca4g08594 387 Pfam EamA-like transporter family 12 137 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08594 Seca-Chr4 204864169 204874959 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08594 15 349 Nodulin-like Gene Family AT1G25270 40.588 2.73e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08594 - - aprc:113856022 545.814