Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08581 ATGGATGTTACTTCTCTTGGTCCAAATAGAAACATCCAAACCGAACAACATCCTTTGCTGATGGAGCAGCCAGAAACCCGCAATGGCCATCAGCACATAATTGACATTACAAGGAATGATGAAGCATTATCCACATCATCTCATAATGATCAACTCCCTGAAATGCATTTACCACAGAATGAAGATCAACCAGCTGGGGGCACACAAGATTCCACTCATCAAACATCTTCATCTTCTGCATCCAGATTTAACTCTAGAAATTCCTCTTCGTTTAGAAGAGGTGAGGGATATGGTCATCGCAGAAGGAGTCCATTGAATTCTGCACTATGGATTTCTGTTGAGCTTGTTGTCACTGTGAGTCAGATCATAGCATCTATCGTGGTTTTGTCATTATCCAGGAATGAAAATCCCCAAGCCCCATTATTTGCATGGATTGTGGGTTATGCATCTGGTTGTGTTGCCACACTTCCTATTCTTTACTGGCGTTTTCGAAACCGTAATCAAAGCACTGATCAACATACCTCTCAACCATCTCAAGGATCATCTGGAAGCAATCCTCCAGAAAGTACTTATACTGCCATCTCTGTTTCTCATGTTTCAGATGAGGACAATGGCCATGCTACACAATCAGCAGCAAGAAACACTATAATTCCTGGAGCCTTTACTTCTAGGTATGATTCTTTTACCCTTCTCTTTTCTTTCTTCGCCTCATTTTTAAGAGAGAGGGCAGGGGTATTAGCCCTGGCATTCAGTATTCGCCTTTTGTTGTGA 771 0.4202 MDVTSLGPNRNIQTEQHPLLMEQPETRNGHQHIIDITRNDEALSTSSHNDQLPEMHLPQNEDQPAGGTQDSTHQTSSSSASRFNSRNSSSFRRGEGYGHRRRSPLNSALWISVELVVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRNQSTDQHTSQPSQGSSGSNPPESTYTAISVSHVSDEDNGHATQSAARNTIIPGAFTSRYDSFTLLFSFFASFLRERAGVLALAFSIRLLL. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08581 256 MobiDBLite consensus disorder prediction 1 21 - -
Seca4g08581 256 MobiDBLite consensus disorder prediction 43 101 - -
Seca4g08581 256 MobiDBLite consensus disorder prediction 169 191 - -
Seca4g08581 256 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 21 209 - -
Seca4g08581 256 MobiDBLite consensus disorder prediction 43 92 - -
Seca4g08581 256 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08581 Seca-Chr4 204538584 204540199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08581 1 239 C3H Transcription Factor Family AT1G80400 42.169 2.25e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08581 - - gmx:100819516 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08581 4 204538584 204540199 Seca4g08581 4 204538584 204540199 ECH