Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08576 ATGAATATAATTTTGGTTTCTAGACATATCCTTGGTGAAGCTCTTGGGTCTATAAGTCTCAAGGAACTAAAGAACCTCAAGAGTAGATCGGAGAAAGGTTTAGGTAGAGTTAGATCTAGAAAACATGAAACATTGTTTGCTGATATAGAGTTCGTGCAAAAGCGAGTACTCATCAATATCTCTCCTTCTCCGTTATTAATTTTGCTTTACCTGTTTCCTTATACATCATATATTTAG 237 0.346 MNIILVSRHILGEALGSISLKELKNLKSRSEKGLGRVRSRKHETLFADIEFVQKRVLINISPSPLLILLYLFPYTSYI. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08576 78 Pfam K-box region 7 55 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08576 Seca-Chr4 204380246 204380769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08576 2 56 MADS-box Gene Family AT2G42830 65.455 4.42e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08576 K09264 - gmx:100817239 85.8853