Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08570 ATGAAGAAAGAAAAGAGTGTCACTGTGAAAGCTGGTGAGGTCCCTGGTCGATTGACTCGTGCTCAAGCTGCTGCTTTTCGTGCTTCTGGACAGTTGCCCCCTTTGAAGGGGGCACCACAAGGAAGTCAGAAGCAGTCCCTAGGAGCCAATTCAAAAAGAGCAGTTTCAGACAATACATGTCTTCCGCGAAAGAAGAGGGCTGTTTTTCAGGATGTCACTAACGTTTGCTGTGAAAATACATACACTAGCTGTTTCAATGCAGCTAAAATTCAGGTTCCATCAGTTGCTGTGGAGCTACCACAACTTCAATTTGACTCAAAAGCAGAGAGTTTGCCACAAACGGGGCTTAGATCAGAAGATGTCATGTGCTCAGTTAATTTGGAAGACAATGCAATTCTTCAGCTGAGTGCCAACCGGTGTGGCACAGATGATAATCTGCTTGACAGCCAGACATCTGGAATATCTGCTCAGCCTTTGATTTCTCAAAAGAAAGCTTCACAAACTGTTGCAGCAAAGAAAGGTAGCCTTTCTGAATCTCTGAATGCATCAAAGGATCCAGATGTTGCTGATATAGATGCTGATTTTGAGGACCCTCAACTGTGCAGCATCTATGCCACTGATATCTATGACAACTTGTGTGTTGCTGAGCTGTCGAGAAGGCCTTGTCCTAATTTCATGGAAACAGTACAGCGAGATATCACTCAAAGCATGCGTGGGATACTGGTTGATTGGCTTGTAGAGGTTTCTGAGGAATACAGATTGGGAGCAGACACTCTTTACCTCACTGTATATCTCATAGATTGGTTTCTCTCAAAAAATTACATTGAAAGACAAAGACTTCAGCTGCTTGGCATCACCTGCATGCTAATTGCCTCGAAGTACGAAGAAATTAATGCCCCTCGTATTGAAGAATTCTGCTTCATCACAGACAACACATACACAAAAGAAGAGGTACTTAAAATGGAAACTGAAGTGTTGAAGTCCTCTGCATATAAACTGTTTGCTCCCACTACAAAAATTTTCCTCAGGTACTTGTTGACATTTTATCATTAA 1053 0.4264 MKKEKSVTVKAGEVPGRLTRAQAAAFRASGQLPPLKGAPQGSQKQSLGANSKRAVSDNTCLPRKKRAVFQDVTNVCCENTYTSCFNAAKIQVPSVAVELPQLQFDSKAESLPQTGLRSEDVMCSVNLEDNAILQLSANRCGTDDNLLDSQTSGISAQPLISQKKASQTVAAKKGSLSESLNASKDPDVADIDADFEDPQLCSIYATDIYDNLCVAELSRRPCPNFMETVQRDITQSMRGILVDWLVEVSEEYRLGADTLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYKLFAPTTKIFLRYLLTFYH. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08570 350 Gene3D - 211 347 - -
Seca4g08570 350 PANTHER CYCLINS 167 346 IPR039361 -
Seca4g08570 350 Gene3D - 222 334 - -
Seca4g08570 350 SUPERFAMILY Cyclin-like 196 328 IPR036915 -
Seca4g08570 350 FunFam Mitotic cyclin 6 221 321 - -
Seca4g08570 350 SMART cyclin_7 243 327 IPR013763 -
Seca4g08570 350 MobiDBLite consensus disorder prediction 29 52 - -
Seca4g08570 350 CDD CYCLIN_AtCycA_like_rpt1 197 328 - -
Seca4g08570 350 MobiDBLite consensus disorder prediction 36 52 - -
Seca4g08570 350 Pfam Cyclin, N-terminal domain 207 328 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08570 Seca-Chr4 204274008 204279453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08570 1 346 Core Cell Cycle Gene Families AT1G80370 50.000 7.24e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08570 K06627 - gmx:100789757 450.284