Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08528 ATGGAGAGCTTAAAAGCACCTTTCAAGGGTATTGTAAACGATTTTCAAGCAAGAGCAGTGCACTATAAAGAAGATTGGACTTGTGGTCTCAGGTCAGGAATTGGGATATTGGCCCCAACTACCTATATTTTCTTTGCTTCTGCTTTACCTGTTATTGCCTTTGGCGAGCAGCTCAGTAGAGACACAGAAACACTGGCTTCTACAGCCATTTGTGGAATCATACACTCAATTTTGGGTGGCCAACCTCTCCTGATACTAGGAGTAGCAGAACCCACTATCCTTATGTACACCTATTTGTACAACTTTGCTAAAGATAAGGAAGGCTTGGGACAAGAACTCTTTTTGGCTTGGGCAGGATGGGTTTGTGTATGGACTGCTCTCTTGCTGTTTCTTCTAGCAATCTTCAATGCTGGCTATATCATCAATAGGTTTACAAGGATTGCGGGTGAGCTTTTTGGCATGCTGATCACAGTCTTGTTCATTCAAGAGGCTATCAAGGGAATGGTAGATGAGTTTAGAATTCCTAAAAAGGGAGACCCAACATCGGACAAGTACCAATTTCATTGGCTGTATGCAAATGGATTGCTGGGTATTATATTCACCTTTGGTCTTCTCTATACTTCTTTAAAAAGCAGAAGAGCGAGGTCATGGTTATATGGGACAGGATGGTTCAGAAGTTTCATTGCAGACTATGGGGTGCCTTTAATGGTGGTGGTGTGGACAGCTCTATCATTCACAGTACCAAGTAAACTGCCTTCTGGAGTTCCCAGAAGGCTCATTGCTCCTCTGGCTTGGGAATCTACATCTTTGCATCATTGGACAGATATGGGGAAGGTTTCTCCAGCATACATTTTTGCTGCTTTTATTCCCGCCTTAATGATAGCCGGGCTTTACTTCTTTGACCATAGTGTTGCTTCTCAAATGGCACAACAAAAAGAATTCAATCTCAGGAAACCTTCTGCATATCACTATGACATATTGTTGTTAGGATTCATGACTTTGCTTTGTGGATTAATTGGCTTACCCCCTTCAAATGGAGTTCTGCCTCAATCTCCTATGCACACCAAGAGCCTGGCTGTTCTCAAGAGACAGTTGATCCGAAGAAAGATGGTAAAAAGTGCCAAGGAAAGCATAAGACAGAAAGCTAGCAACTATGAAATCTATGGGAAGATGCAAGCAGTTTTTATAGAAATGGATAACAGTCCAGATAATCATTCAGTGGTCAAAGAACTAGAGGATTTGAAAGAGGTTGTCCTAAGTGGTGAAGATAAAGGAGACAACAATAATACATTTGATCCTGAGAAACACATTGATGCATATTTGCCTGTCAGAGTAAAGGAGCAGAGAGTGAGCAATCTCTTACAATCACTCCTTGTAGGAGCAGCAGTCTTTGCTATGCCTGCCATAAAAAAGATACCAACTTCAGTTCTGTGGGGATACTTTGCTTACATGGCTATTGATAGTCTTCCTGGAAATCAATTCTGGGAGAGGATACTACTTCTTTTTGTAGGACCTAGTAGGCGGTACAAATTATTAGAAGGGGATCATGCATCCTTTGTTGAGTCAGTACCTTTCAGATACGTAGTCTTCTTCACACTCTTCCAATGTGTGTACTTCTTGGTTTGTTTTGGAGTGACATGGATTCCCATAGCTGGAATGCTGTTCCCCTTGCCTTTCTTTTTGCTGATCACATTGAGGCAGCATATACTCCCCAAGCTGTTCAGTCCACACCATCTTAGGGAACTAGACGCAGCTGAATATGAAGAAATAGCTGGTGCTCCAAGACTAAGTTTCAATATGTCTTTCAGGGAGGTGGAATCATCTCGAGTTGGATCCAAGGAAATAGGTAATGCTGAAATATTGGATGAATTAACTACTAATAGAGGGGAGTTGAAGGTCAGAGCTTTTAGCTTTAGTGAGGAAAGAAATAGCCAGGTTTATCCTGATGAGGAAATGGATCCACACTAA 1968 0.4177 MESLKAPFKGIVNDFQARAVHYKEDWTCGLRSGIGILAPTTYIFFASALPVIAFGEQLSRDTETLASTAICGIIHSILGGQPLLILGVAEPTILMYTYLYNFAKDKEGLGQELFLAWAGWVCVWTALLLFLLAIFNAGYIINRFTRIAGELFGMLITVLFIQEAIKGMVDEFRIPKKGDPTSDKYQFHWLYANGLLGIIFTFGLLYTSLKSRRARSWLYGTGWFRSFIADYGVPLMVVVWTALSFTVPSKLPSGVPRRLIAPLAWESTSLHHWTDMGKVSPAYIFAAFIPALMIAGLYFFDHSVASQMAQQKEFNLRKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKRQLIRRKMVKSAKESIRQKASNYEIYGKMQAVFIEMDNSPDNHSVVKELEDLKEVVLSGEDKGDNNNTFDPEKHIDAYLPVRVKEQRVSNLLQSLLVGAAVFAMPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVGPSRRYKLLEGDHASFVESVPFRYVVFFTLFQCVYFLVCFGVTWIPIAGMLFPLPFFLLITLRQHILPKLFSPHHLRELDAAEYEEIAGAPRLSFNMSFREVESSRVGSKEIGNAEILDELTTNRGELKVRAFSFSEERNSQVYPDEEMDPH. 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08528 655 Pfam HCO3- transporter family 193 363 IPR011531 GO:0006820|GO:0016020
Seca4g08528 655 Pfam HCO3- transporter family 7 173 IPR011531 GO:0006820|GO:0016020
Seca4g08528 655 Pfam HCO3- transporter family 443 533 IPR011531 GO:0006820|GO:0016020
Seca4g08528 655 Gene3D Helical hairpin bin 18 60 - -
Seca4g08528 655 PANTHER ANION EXCHANGE PROTEIN 5 591 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08528 Seca-Chr4 203261419 203267650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08528 1 650 Antiporters AT1G74810 71.021 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08528 K24194 - gmx:100811184 1131.7