Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08518 ATGGAACAAACTGAAACTAACAATACTGCTGCGGTTGATCCCAAAAATTCTAAATCCCCCAATAAAGATAATTTGGATTCTCATCATATTCCTGAAGGTTACAAAAGGATAAGTGAACTAACAGATGAGGATATTAGAGGGCTTGAGTTTGATACAGAAGAGGATGCATATGATTTCTACTGTGAGTATGCTAAATTCATAGGATTTTCTGTTAGGAAAGGTGATGTCTATAGAAATTGTAATGGTTCAATTATAATGAGGCAATTGGTTTGTAATAGAGAGGGAGAGAGAAGTGAGAAGCATCTTAATAGGACTGATAGAATTAGGGAGGCAAAGGCCTTGACCCGAACTAAGTGTAATGCAAGGCTCCGTATTTCCTTAGATTATAAAAGTAGAAAGTGGAGGGTTGGAATCTTTGAGCCAACTCACAACCATGAATTGACTCTTGCAAGTATGATACATTTGCTACCTGCTTATCGTGGGTTGAGTGTAGCTGATAAGGCACATGTTGACTGTCTACATCATTATGGTGTTAGGACTTGTCATATAATGGATCTTATAATGGGTCAAAAGGGAGGCTATTCTGATCTTGGTTTTTGTGAGAAGGATTTGTACAATCATATTGATAAAGAGAATCGGGCAAAAATAGAGGATGGGGATGCTTTTGTTGCGTTATGTTACCTTCAATCAAAGCTTAACAAGGCTGCCCGTAGAAATCCTCACAATTTTGTAAAAAACATTGAATCTATTCACAAGTTAGCAGAACAGATGGAAAGGCAGGAAGGTATTGACTTGAACATTGCTAATATATCAAGAGTTGTCCATGACCCAACTGTTTTTAAAACTAAAGTTAGGATATGCACTAAATATGCTACTCGCGATCAATTGGATACAGCTCTTGAAGAAGAATCATCTATTGAGACTGATGAAGATTCAAGAGATGAAAGTGTGAACAAAGCTCAACAGAATGATACTGGTATTGCATTCAATAGAATGAATACCCCCTCCCTATTTGGTAATCATTTGTACTATCCAAACATGAATGCTCTGAGTATTTCAACACCTGTGCATATTAGACCTTCAATGATTCATGGACTTGGTCAAGGATTTGTTGGTAATAGAGCTGAGGACATGCGACATTACCCCCAAATGTATATGCAGCAATCTCTGTATACACCTCCAGTAGTTCATAATGTTAACGCATATGGTAATAGTTTACAGTTTACTAATGTTGTGAACAACATTGAAAGGAATAATGGGGTAGGAAGGAAGAAGGAAGAGTTTTGGACATATATGAAGAGATAA 1305 0.3693 MEQTETNNTAAVDPKNSKSPNKDNLDSHHIPEGYKRISELTDEDIRGLEFDTEEDAYDFYCEYAKFIGFSVRKGDVYRNCNGSIIMRQLVCNREGERSEKHLNRTDRIREAKALTRTKCNARLRISLDYKSRKWRVGIFEPTHNHELTLASMIHLLPAYRGLSVADKAHVDCLHHYGVRTCHIMDLIMGQKGGYSDLGFCEKDLYNHIDKENRAKIEDGDAFVALCYLQSKLNKAARRNPHNFVKNIESIHKLAEQMERQEGIDLNIANISRVVHDPTVFKTKVRICTKYATRDQLDTALEEESSIETDEDSRDESVNKAQQNDTGIAFNRMNTPSLFGNHLYYPNMNALSISTPVHIRPSMIHGLGQGFVGNRAEDMRHYPQMYMQQSLYTPPVVHNVNAYGNSLQFTNVVNNIERNNGVGRKKEEFWTYMKR. 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08518 434 MobiDBLite consensus disorder prediction 1 18 - -
Seca4g08518 434 MobiDBLite consensus disorder prediction 300 330 - -
Seca4g08518 434 MobiDBLite consensus disorder prediction 19 33 - -
Seca4g08518 434 Pfam FAR1 DNA-binding domain 58 148 IPR004330 -
Seca4g08518 434 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 17 220 - -
Seca4g08518 434 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08518 Seca-Chr4 202927749 202931005 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g08518 FAR1 4.3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08518 - - ccaj:109792835 233.802