Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g08478 | ATGTGTCTGATGAGGCTACTATTGATGAGCAACCTAATCTTTGTCCTAGCATTGGAATGGAATTTGATTCCCTTGAGGATGTTAAAGAGTTACACATCATTTGCTAAGAAAATAGGTTTTGGTATTCGTACTCGTTCAACTAAAGAGAATTTTTGTATACTTGTATGTTCTAATGAAGGCAAGCATATAGTCAAGAATGGTGGGGAAGAGGAATGTAATGTTTGCATGGGGAAAACAAAGAAAAAGTGCTCAACTTCAAGAACAGATTGTAAGGCATCACTAATTGTTTCAAAAGCATGGAAGAGAAGTAAATGGATTATCAAAAGCTTTGATAATGTTCATAATCATGCCATGATTAGCCCTAAGAGTGTGGGCTATCTTTGA | 384 | 0.3568 | MCLMRLLLMSNLIFVLALEWNLIPLRMLKSYTSFAKKIGFGIRTRSTKENFCILVCSNEGKHIVKNGGEEECNVCMGKTKKKCSTSRTDCKASLIVSKAWKRSKWIIKSFDNVHNHAMISPKSVGYL. | 128 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g08478 | 127 | Pfam | FAR1 DNA-binding domain | 31 | 118 | IPR004330 | - | |
Seca4g08478 | 127 | PANTHER | FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED | 29 | 123 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g08478 | Seca-Chr4 | 202180929 | 202181312 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | FAR1 | Seca4g08478 | FAR1 | 4.1e-11 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g08478 | - | - | mtr:112420966 | 150.214 |