Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08478 ATGTGTCTGATGAGGCTACTATTGATGAGCAACCTAATCTTTGTCCTAGCATTGGAATGGAATTTGATTCCCTTGAGGATGTTAAAGAGTTACACATCATTTGCTAAGAAAATAGGTTTTGGTATTCGTACTCGTTCAACTAAAGAGAATTTTTGTATACTTGTATGTTCTAATGAAGGCAAGCATATAGTCAAGAATGGTGGGGAAGAGGAATGTAATGTTTGCATGGGGAAAACAAAGAAAAAGTGCTCAACTTCAAGAACAGATTGTAAGGCATCACTAATTGTTTCAAAAGCATGGAAGAGAAGTAAATGGATTATCAAAAGCTTTGATAATGTTCATAATCATGCCATGATTAGCCCTAAGAGTGTGGGCTATCTTTGA 384 0.3568 MCLMRLLLMSNLIFVLALEWNLIPLRMLKSYTSFAKKIGFGIRTRSTKENFCILVCSNEGKHIVKNGGEEECNVCMGKTKKKCSTSRTDCKASLIVSKAWKRSKWIIKSFDNVHNHAMISPKSVGYL. 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08478 127 Pfam FAR1 DNA-binding domain 31 118 IPR004330 -
Seca4g08478 127 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08478 Seca-Chr4 202180929 202181312 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g08478 FAR1 4.1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08478 - - mtr:112420966 150.214