Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08411 ATGTCCCACATCGGTTCGATTGCCTCACTCACACCTCACCTTGGTGATTCACCACACACTTTTACCCATTTCTTACTAAGACCTGTGAGGCTATCTGCAAGCTTTCATTCGTTTTCCGCAACATTGGTTGTCACCACTAGAGCCCTCCATGTCTCCCTAGGAAGTGAGGGTTGTAGAGCTTTTTCTTCTTGGATTCTAAAGCAACTTCGAGAGGAGACGACTTCTATGTGTGGAAGTCAGATACAGGTGTCACCTGATCAGGTACAACTGCTTGCAGTGCTTGTAGAGATTCTTGGAGCAGAACAGTGTATTGAAGTTGGTGTCGCTCATCCAATTTAA 339 0.4572 MSHIGSIASLTPHLGDSPHTFTHFLLRPVRLSASFHSFSATLVVTTRALHVSLGSEGCRAFSSWILKQLREETTSMCGSQIQVSPDQVQLLAVLVEILGAEQCIEVGVAHPI. 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08411 112 Pfam O-methyltransferase 62 108 IPR002935 GO:0008171
Seca4g08411 112 Gene3D Vaccinia Virus protein VP39 52 110 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08411 Seca-Chr4 199642450 199642921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08411 65 108 Monolignol Biosynthesis Gene Families AT3G62000 75.000 1.41e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08411 - - cpap:110814181 73.559