Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08392 ATGGCCCTCCCTGCCACCATGAAGGTTCTCGGAGTGGTTTTGGGGATTGTGTTGATAATTATTATGGGGATTTTGTCAGAAATTAGTGTGGAATTGTTAGTGCGTTTTTCTGTTTTGTGTAAAGCATCCTCTTATGGGGAGGTTGTTCAACATGCTATGGGAAAGCCTGCTAGGATTTTGTCTGAAATCTGTATTATAATGAATAATGCTGGTGTTTTGGTGGTTTACTTGATAATCATGGGGGATGTTATGTCTGGTTCTGTTCATCATATGGGGGTTTTTGATCAGTTATTGGGAAATGGGGTGTGGGATCAGAGAAAGCTTGTGGTTTTTGTTGTTATGGTGGTTTTTCTTGCACCCCTTTGTTCACTTGACAAGATTGATTCATTGAGTTTGACTTCAGCTGCCTCAGTTGCTCTTGCTGTCATCTTTGTTGTCATTGCTTTCATTGTTGCTTTCATTAAGCTTGTTGAAGGACGGATTGATACTCCAAGGATGACTCCTGATTTTAGCTCAAAAAAGGCCATATTGGATTTGCTAGTGGTGATTCCTATCATGACCAATGCATATGTTTGCCATTTTAATGTGCAGCCAATATACAATGAACTTCAAGGAAGGTCTCCTCAGAAGATGAACCGAGTAGGAAGGATCACCACAATTTTGTGCATCCTAGTTTATGCTTCCACAGCTCTGTCAGGTTACCTACTATTTGGGGATGATACAGAGTCTGATGTTCTGACTAATTTTGATAAGGATCTTGGAATTCGGTTTAGTTCAGCATTGAACTATATTGTCCGGGTTGGCTACATTCTCCATTTGATACTTGTCTTCCCTGTTATTCATTTCTCCCTACGCCAAACAGTGAATGCCTTGTTGTTTGAGAAATCACCTCCCCTATCAGAAAGTAGGAAGAGATCACTGGGGTTGACTTTTGTTCTGTTGGTACTCATATATATTGGCTCTACCATGATTCCAAACATTTGGACAGCTTTTAAGTTCACTGGGGCAACAACAGCTGTTTCATTGGGTTTTATATTTCCATCTCTTGTTGCATTAAGATTAAGTCATAAGGGGGATTTGAGCCATGGAGAATGGATTATATCATGGGTGTTGTTGATATTGGCTGTGATTGTTAGCATAGTAGGAGTTGTTGGCAATGTCTATAGCATCCAGAGTAAGTCTCAATGA 1188 0.4007 MALPATMKVLGVVLGIVLIIIMGILSEISVELLVRFSVLCKASSYGEVVQHAMGKPARILSEICIIMNNAGVLVVYLIIMGDVMSGSVHHMGVFDQLLGNGVWDQRKLVVFVVMVVFLAPLCSLDKIDSLSLTSAASVALAVIFVVIAFIVAFIKLVEGRIDTPRMTPDFSSKKAILDLLVVIPIMTNAYVCHFNVQPIYNELQGRSPQKMNRVGRITTILCILVYASTALSGYLLFGDDTESDVLTNFDKDLGIRFSSALNYIVRVGYILHLILVFPVIHFSLRQTVNALLFEKSPPLSESRKRSLGLTFVLLVLIYIGSTMIPNIWTAFKFTGATTAVSLGFIFPSLVALRLSHKGDLSHGEWIISWVLLILAVIVSIVGVVGNVYSIQSKSQ. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08392 395 Pfam Transmembrane amino acid transporter protein 2 385 IPR013057 -
Seca4g08392 395 PANTHER AMINO ACID TRANSPORTER 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08392 Seca-Chr4 199148025 199150279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08392 1 395 Amino Acid or Auxin Permease AAAP Family AT1G80510 78.535 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08392 - - gmx:100813328 622.854