Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08390 ATGCCTAAATTGGTTCTGAAAGCTGGGAGCAGACCTCCATGGGTAGGTCTTGCAGCTGCAGTTTGGATCCAAATTGCTGCTGGCAATGCCTACAACTTTCCCCTCTACTCCTCTGCGCTGAAATCCGTATTGGGTCTCAACCAGCAGCAGGTGACTATTCTGGGAGTGGCCAATGATGTTGGGGAGAACGTGGGTCTGCTTCCTGGTATTGCCTGCAACAAGTTCCCTCCTTGGTCTTTGCTTCTGGTTGGTGCTGTGCTTTGTTTCTTTGGTTATGGGGTTATCTGGCTGGCTGTTAGCCAAACTGTCTCTGGCTTGCCTTATGTTCTGTTATGGCTTGCACTTTGTGTTGCCACTAATAGTAGTGCATGGTTTGGCACAGCTGTGCTTGTTACCAATATGAGAAACTTTCCTCTCAGTAGAGGGACCATCTCTGGCATTCTTAAAGGTTATGTGGGGATCAGTGCTGCAGTATATACATTAATATATAGCATGATACTGAAAGGATCTGCTTCTAAATTACTTTTGTTCCTAGCAATTGGAATTTCTATTGTATGTTTAGTTATGATGTACTTCATTCGGCCTTGTACTCCTCCTTCTGGGGAAGACTCTTCAGTGCATGTCCATTTTATTTTTACCCAAGCTGCAAGTATTTTACTTGCCAGCTATCTTGTTACGACCACAATAGTGAGTGATGTGGTCTCTATAAAAGATGCTGTTTCTTACATCTTAGTTGCTATAATGGTTATACTTCTGATGACTCCCCTTGCAATTCCTGCCAAAATGACACTATTTCCTGCCAATCCAAAGCACAATGTTCCACTAGTTGGTTCTTCAGATCAGTTGCCATCAGCTGATGATGTTTCCACACAAACAACTCCATTGGTAACACCATCCTCTTCAGCTGCATATCTTGGAAGTTTTCATGAAACTGAGGATGCCTCAGATGTTGAGATACTTATTGCAGAGGGGGAGGGAGCTGTAAGGAAGAAAAGGAGGCCTAAAAGGGGAGATGATTTCAAGTTCCGTGAAGCTTTAATCAAGGCTGATTTCTGGCTTCTTTGGTTTTCTTATTTTCTTGGGGTTGGCTCAGGAGTAACAGTTCTCAATAATTTGGCTCAAATTGGAGTTGCTTTGGGTGTAGAAGATACAACCATATTGCTGTCAGTATTCAGCTTTTGCAATTTTATTGGTCGTCTTGGTGCTGGTGCTGTCTCTGAACACTTTGTTAGGTTGATAACACTACCACGAACATTTTGGATGACAACTACACAAATAATTATGATCATAGCATTTTTACTTTATGCTTCAGCTCTGGATGGCACTCTTTATGTTTCAACAGCTTTGCTTGGGATCTGCTATGGAGTTCAATATTCTATAATGGTTCCAACTGTTTCTGAGCTATTTGGTTTGAAGCACTTTGGTGTTATTAGTAGCTTCATGATGCTAGGAAATCCAATTGGTGCCCTTCTATTTTCTGTTTTCCTTGCTGGTAATGTGTATGATACAGAAGCTGCAAAGCAAGGAAACTCCACCTGCTATGGTGCAAATTGCTTTAGGCTCACTTTTCTGGTTTTGGCTGGTGTATGTGGACTTGGTACCATCTTGAGTATAATTTTGACAGTTAGAATACGGCCAGTATATCAAATGCTCTATGCTGGGGGTTCATTTCGTCTGTCTCAGACTTCAGATCACTGA 1698 0.4211 MPKLVLKAGSRPPWVGLAAAVWIQIAAGNAYNFPLYSSALKSVLGLNQQQVTILGVANDVGENVGLLPGIACNKFPPWSLLLVGAVLCFFGYGVIWLAVSQTVSGLPYVLLWLALCVATNSSAWFGTAVLVTNMRNFPLSRGTISGILKGYVGISAAVYTLIYSMILKGSASKLLLFLAIGISIVCLVMMYFIRPCTPPSGEDSSVHVHFIFTQAASILLASYLVTTTIVSDVVSIKDAVSYILVAIMVILLMTPLAIPAKMTLFPANPKHNVPLVGSSDQLPSADDVSTQTTPLVTPSSSAAYLGSFHETEDASDVEILIAEGEGAVRKKRRPKRGDDFKFREALIKADFWLLWFSYFLGVGSGVTVLNNLAQIGVALGVEDTTILLSVFSFCNFIGRLGAGAVSEHFVRLITLPRTFWMTTTQIIMIIAFLLYASALDGTLYVSTALLGICYGVQYSIMVPTVSELFGLKHFGVISSFMMLGNPIGALLFSVFLAGNVYDTEAAKQGNSTCYGANCFRLTFLVLAGVCGLGTILSIILTVRIRPVYQMLYAGGSFRLSQTSDH. 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08390 565 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 549 - -
Seca4g08390 565 Pfam Nodulin-like 13 259 IPR010658 -
Seca4g08390 565 SUPERFAMILY MFS general substrate transporter 332 546 IPR036259 -
Seca4g08390 565 CDD MFS_Mch1p_like 12 534 - -
Seca4g08390 565 Gene3D MFS general substrate transporter like domains 346 548 IPR036259 -
Seca4g08390 565 SUPERFAMILY MFS general substrate transporter 8 198 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08390 Seca-Chr4 199119750 199122762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08390 1 565 Nodulin-like Gene Family AT1G80530 63.781 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08390 - - psat:127087605 946.806