Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08313 ATGTTGGTGTCCTTCTCAAACCAACTCATCTGTGCCCTGTTGCTCCTCGTTTCAGCCGCCACCGCCACCGACCACATTGTTGGAGCCAATCGTGGTTGGAACCCTGGCATCAACTACACTCTCTGGGCCAACAACCAAACTTTCTATGTCGGCGACTTCATCTGTCATTTAGGTACCAGAAGAACCAGTACAATGTGTTTGAGGTGA 207 0.5024 MLVSFSNQLICALLLLVSAATATDHIVGANRGWNPGINYTLWANNQTFYVGDFICHLGTRRTSTMCLR. 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08313 68 Gene3D - 21 65 IPR008972 -
Seca4g08313 68 ProSiteProfiles Phytocyanin domain profile. 23 68 IPR003245 GO:0009055
Seca4g08313 68 SUPERFAMILY Cupredoxins 21 56 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08313 Seca-Chr4 197553936 197554859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08313 10 60 Phytocyanin Superfamily AT3G01070 41.176 3.04e-09 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08313 - - ccav:112511628 83.9593