Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08311 ATGGCAGATCTCAAAGAGCGGCTACTCCCACCAAAACCTGCATCAGCTTTGAACGTAAGAGAGACTGCCAATAGACCGTCTGCCTCTGGAAGGCAAAATTTTCAAGGAGTGGATGTTCTGGGGCTGAAGAAGCGAGGTCAAGGTCTCCGATCATGGATTCGTGTTGACACATCTGGAAACTCTCAGGCAATTGAGGTAGACAAGTTTACTATGATGCGACGTTGTGATCTACCTGCACGCGATCTTCGCCTACTTGATCCTCTGTTTGTCTATCCATCAACAATCCTTGGTAGGGAAAAGGCAATTGTTGTAAATCTAGAGCAAATACGGTGTATAATTACAGCAGATGAGGTTCTTCTCTTGAATTCCCTTGATAGTTATGTATTGCATTATGTGATGGAGCTACAACGACGATTAACTACAACTGGGGGAGGTGAGGTCTGGCAATCAGACAATTCTGACATGAACCGAAGGAGAGGTAGTAGGAATTTTGAAAATGCATACAGCGACACTTCCCCTGATTATTTACCTTTTGAGTTCAGGGCTCTTGAAGTTGCCTTGGAGGCAGCATGCACGTTTCTTGACTCCCAGGCAGCAGAGTTAGAAATTGAAGCATATCCATTGCTGGATGAACTGACATCAAAGATCAGTACTCTAAATTTGGAACGTGTTCGTCGGTTGAAAAGTAGACTTGTTGCCCTTACTAGGAGAGTCCAGAAGGTTAGAGACGAAATAGAGCAGCTTATGGATGATGATGGTGATATGGCTGAAATGTATCTTACTGAGAAGAAAAGACGGATGGAGTTGTCATTTTATGGAGATCAATCTATGACTGGATATAAATCAGTTGATGGTGCATCCATTTCAGCTCCAGTCTCTCCTGTTTCATCACCACCTGATTCTCGGAGGCTTGAAAAGAGCTTGAGCATTGCTAGGAGTCGACATGAAAGCATGAGGAGTTCTGAAAGTGCTACAGAAAGTATAGAAGAGCTTGAGATGTTGTTAGAAGCTTACTTCGTTGTCATTGACAGCACTCTAAACAAGTTGACTTCGTTGAAAGAGTACATTGATGACACTGAAGATTTCATCAACATTCAACTGGATAATGTGCGTAATCAGCTTATCCAGTTTGAGCTTTTGCTCACAACTGCAACATTTGTCGTTGCCATATTTGGTGTGGTAGCAGGAATATTTGGGATGAATTTTGAAATTCCATTATTTGATGTCCCATCTGCATTCCAGTGGGTCCTTATAATAACAGGAGTTTGTGGAGTCTGCATATTTTCTGCATTTGTATGGTTCTTCAAGTACAGAAGACTCATGCCCCTATAG 1332 0.4242 MADLKERLLPPKPASALNVRETANRPSASGRQNFQGVDVLGLKKRGQGLRSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTTTGGGEVWQSDNSDMNRRRGSRNFENAYSDTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFYGDQSMTGYKSVDGASISAPVSPVSSPPDSRRLEKSLSIARSRHESMRSSESATESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPLFDVPSAFQWVLIITGVCGVCIFSAFVWFFKYRRLMPL. 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08311 443 Gene3D Magnesium transport protein CorA, transmembrane region 130 374 - -
Seca4g08311 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 19 441 IPR039204 -
Seca4g08311 443 Pfam CorA-like Mg2+ transporter protein 333 438 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca4g08311 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 433 IPR045863 -
Seca4g08311 443 FunFam Magnesium transporter MRS2-1 381 441 - -
Seca4g08311 443 FunFam Magnesium transporter MRS2-1 40 123 - -
Seca4g08311 443 CDD Mrs2_Mfm1p-like 52 440 IPR039204 -
Seca4g08311 443 Gene3D - 39 123 - -
Seca4g08311 443 Coils Coil 224 251 - -
Seca4g08311 443 Gene3D Magnesium transport protein CorA, transmembrane region 381 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08311 Seca-Chr4 197523631 197528954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08311 1 443 MRS2 Gene Family AT1G16010 86.036 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08311 K16075 - gmx:100779803 791.571