Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08305 ATGATTATAAACGTGAAGGAGTCCACGATGGTGCGTCCGGCGGAGGAGACGCCGCAGAGGGCGTTGTGGAACTCCAACGTGGATTTGGTGGTGCCGAATTTTCACACGCCTAGCGTGTATTTCTACAGGCCAAACGGCGCCTCTAATTTTTTTGACGCAAAGATTCTGAAGGACGCTCTGAGCAAGGCGCTTGTTCCTTTCTACCCAATGGCTGCGCGCCTTCGCCGCGACGACGACGGACGCGTTGAGATTTATTGCGACGGCCAAGGGGTCCTCTTCGTCGAGGCGGAAACCACTTCCTCCATCGATGATTTCGGAGACTTCGCTCCGACGCTTCAGCTCCGGCAACTCATCCCCGCCGTCGATTACTCTCCCGGCATCGAAACGTATCCGCTGTTGGTGTTGCAGGTAACATATTTCAAATGTGGAGGCGTATCATTAGGTGTTGGTATGCAACACCATGTAGCAGATGGAGCCTCTGGTCTTCACTTCATCAATTCATGGTCAGATGTTGCTCGTGGCCTGGATGTTTCAATCCCACCATTCATTGACCGGACACTACTCCGTGCCCGGGATCCACCTCGACCTGTTTTTGATCACATTGAATACAAGCCCCCACCAGCAATGAAGACTCCCCTGCAACCAGCTAAACCAGGCTCAGACAATGTGACTGTCTCTATCCTCAAATTGACCCGTGACCAGGTCAGCACCCTGAAGGGTAAGTCCAGAGAAGATGGCAACACAATCAGCTACAGCTCCTATGAGATGTTAGCTGGTCATGTGTGGAGAACTGTGTGTAAAGCAAGAGCACTCCCTGATGATCAAGAAACCAAATTGTACATTGCAACTGATGGAAGGTCAAGGCTGCAACCTACACTCCCACCAGGTTACTTTGGCAATGTGATCTTCACAACCACACCAATAGCAGTGGCAGGGGATCTCATGTCAAAACCAACATGGTATGCTGCAAGCAGAATCCATGATGCATTGTTAAGGATGGAAAATGAGTATTTAAGATCAGCTCTGGATTTTCTAGAGTTACAACCTGATCTTAAAGCACTTGTTCGTGGGGCACACACTTTTAGGTGTCCAAATCTTGGTATCACTAGTTGGGTAAGGCTTCCAATCCATGATGCTGACTTTGGTTGGGGAAGGCCCATATTCATGGGACCTGGTGGGATTGCATATGAGGGGCTATCTTTCTTAATTCCAAGCTCAACAAATGATGGGAGCATATCTTTGGCAATTGCTTTGCCGCCTGAGCAGATGAAGGTGTTTCAGGAATTGTTTTATGACATTTGA 1302 0.4908 MIINVKESTMVRPAEETPQRALWNSNVDLVVPNFHTPSVYFYRPNGASNFFDAKILKDALSKALVPFYPMAARLRRDDDGRVEIYCDGQGVLFVEAETTSSIDDFGDFAPTLQLRQLIPAVDYSPGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINSWSDVARGLDVSIPPFIDRTLLRARDPPRPVFDHIEYKPPPAMKTPLQPAKPGSDNVTVSILKLTRDQVSTLKGKSREDGNTISYSSYEMLAGHVWRTVCKARALPDDQETKLYIATDGRSRLQPTLPPGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHDALLRMENEYLRSALDFLELQPDLKALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFLIPSSTNDGSISLAIALPPEQMKVFQELFYDI. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08305 433 Gene3D - 1 205 IPR023213 -
Seca4g08305 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 431 - -
Seca4g08305 433 Gene3D - 211 433 IPR023213 -
Seca4g08305 433 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Seca4g08305 433 FunFam Tryptamine hydroxycinnamoyl transferase 211 431 - -
Seca4g08305 433 Pfam Transferase family 3 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08305 Seca-Chr4 197399813 197405395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08305 1 433 Monolignol Biosynthesis Gene Families AT5G48930 76.905 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08305 K13065 - gmx:100801923 806.208