Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08288 ATGGACACCCTCACCTTTCAGACACAGCCCTTTGCCACCTCACTTGTTTTGGGTGCTTTGTCTCTCCTCTTGTTCTTCTTCTTACTCCGCTTCATACCAGGTGTCACCACCTTTTTCTCTAACAAACGTTCCAAACTTCCCCCAGTACCAGCGGTTCCTGGTCTTCCAGTGATAGGGAATCTGCTGCAATTGAAAGAGAAGAAACCTTACAAGACGTTTACTCAGATGGCTGAAAAATATGGACCCATTTATTCCATCAGAACAGGTGCTTCCACCCTCATTGTTCTCAACTCTGCCCAGGTTGCCAAGGAGGCAATGGTGACCAGATTTCCATCAATTTCAACAAGGAAGCTATCAAATGCACTAAAGATTCTGACTTCTGATAAATGTATGGTTGCTACAAGTGACTACAATGAATTTCACAAAATGGTCAAAAGACACATTCTTGCAAGCTTTCTGGGAGCCAATGCACAGAAGCGACACCGTATCCACAGAGAAGTCATGATGGAAAACATTTCAAGGCAGTTTAATGAACATGTGAAGACCTTCTCTGATTTGGCTGTTAATTTTAGGAACATATTTGTGTTTGAACTTTTTGGACTAGCAATGAAGCAAGTGAGTCTCTCCTTCTTAAATAAGATTAAATAG 648 0.4182 MDTLTFQTQPFATSLVLGALSLLLFFFLLRFIPGVTTFFSNKRSKLPPVPAVPGLPVIGNLLQLKEKKPYKTFTQMAEKYGPIYSIRTGASTLIVLNSAQVAKEAMVTRFPSISTRKLSNALKILTSDKCMVATSDYNEFHKMVKRHILASFLGANAQKRHRIHREVMMENISRQFNEHVKTFSDLAVNFRNIFVFELFGLAMKQVSLSFLNKIK. 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08288 215 SUPERFAMILY Cytochrome P450 43 182 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08288 215 Gene3D Cytochrome P450 35 211 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08288 215 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 23 206 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Seca4g08288 215 Pfam Cytochrome P450 51 199 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08288 215 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08288 215 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08288 Seca-Chr4 196605415 196608054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08288 44 206 Cytochrome P450 AT5G25900 65.644 8.88e-72 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08288 K04122 - gmx:100802970 275.789