Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08287 ATGACCTCATGGGGGAATTTGCAGGCTCTGGGAAATAATCTAGAATCCGTTTATGTGGAGGAGCTTGGGTGCACATTATCAAGAGAGGACATATATAAAACTCTAGTGGTTGATATAATGGAGGGTGCAATTGAGGTGGATTGGCGAGATTTCTTTCCATACCTGAAATGGATTCCAAATAGAAGCATGGAGATGAAAATTCAGAAATTGTATTTCCACAGAAAAGCTGTCATGAAAGCCTTAATGAATGAGCAGAAGAAGCGATTGACTTCAGGAAAGGAAGTGAATTGTTATTTTGACTACCTGATATCTGAAGCTAAAGAACTGAGTGAAGAACAAATTTCCATGCTGATATGGGAGACCATTATTGAGACATCTGATACTACCTTAGTTACAACAGAATGGGCTATGTATGAACTTGCTAAAGACAAAAATCGTCAGAACCGTCTATATGAGGAGCTTCAAAATGTATGTGGACATGAAAAAGTTACAGAAGACCAATTAGCTAAGCTACCTTACTTAGGGGCTGTATTCCATGAAACTTTAAGGAAGCATAGTCCAGCTCCAATTGTCCCACTAAGATATGTTCATGAAGATACTCAATTGGGAGGATTTCATATTCCTGCTGGAAGCGAGATTGCAATAAATATATATGGCTGTAACATGGACAGCAACCGGTGGGAAAATCCTTATCAGTGGACACCTGAGAGGTTTCTTGATGAGAAATATGACCCCATGGATTTGTACAAGACAATGGCCTTTGGAGCAGGAAAGAGGGTGTGTGCAGGCTCTCTTCAGGCCATGTTGATTTCTTGCACAGCAATTGGCAGATTGGTTCAGGAATTTGAGTGGGAGCTTGGACAAGGAGAGGAAGAGAATGTGGATACAGTGGGCCTTACCACTCACAGGCTCCATCCCCTGCTAGTAAAGCTCAAGCCAAGAAATTAG 948 0.4135 MTSWGNLQALGNNLESVYVEELGCTLSREDIYKTLVVDIMEGAIEVDWRDFFPYLKWIPNRSMEMKIQKLYFHRKAVMKALMNEQKKRLTSGKEVNCYFDYLISEAKELSEEQISMLIWETIIETSDTTLVTTEWAMYELAKDKNRQNRLYEELQNVCGHEKVTEDQLAKLPYLGAVFHETLRKHSPAPIVPLRYVHEDTQLGGFHIPAGSEIAINIYGCNMDSNRWENPYQWTPERFLDEKYDPMDLYKTMAFGAGKRVCAGSLQAMLISCTAIGRLVQEFEWELGQGEEENVDTVGLTTHRLHPLLVKLKPRN. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08287 315 Gene3D Cytochrome P450 9 315 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08287 315 PRINTS E-class P450 group I signature 216 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08287 315 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08287 315 PRINTS E-class P450 group I signature 251 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08287 315 PRINTS E-class P450 group I signature 261 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08287 315 PRINTS E-class P450 group I signature 133 159 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08287 315 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 8 315 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Seca4g08287 315 SUPERFAMILY Cytochrome P450 27 314 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08287 315 Pfam Cytochrome P450 32 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08287 315 PRINTS P450 superfamily signature 176 187 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08287 315 PRINTS P450 superfamily signature 124 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08287 315 PRINTS P450 superfamily signature 252 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g08287 315 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 254 263 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08287 Seca-Chr4 196603789 196605376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08287 8 314 Cytochrome P450 AT5G25900 65.584 2.02e-154 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08287 K04122 - gmx:100802970 562.377