Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08259 ATGGAAAGCATAGAGAATCTTCAAGCTGCTAGGAAGTGCTTGAAAACTAGCTTAGAAAAATCAAGTGCTATTGCTTCTGCATTAGATGAATCAGGATCAAGATTGAAGCTACTTAACCAGAGATGTCAATCCTTGGAAGCTGAACTTGGACCAATCTCTATGCAAAAGTGCTTATTTGTTGACATTGGAGACCAAATAGATAGTGTTCTTTGTTCTTCTGCTGCAGTCCTCAGGGTATTTGAAGCTGTTCATCAGCTTGAAAATTCTCTCTTGATTGATCCCAGCTCTGATCTATGCACCTATGTCTCAGACACAAAGAAGCTTGAAGAAGCACTGAAGCTTCTCACTGATAATTGCAACTTAGCACTTGGCTGGCTGCAGGGTATTTTTGAGTTCTTTCAAGACAAAGCAATCACCAATGAGCATTGCCTATTGAATGTGAGGAAATCTTTGAGAATACTCCAAGAATTGAAGGCCATGGAAGAAGGTGCTCACCTTGATGGAGGTCTTCTAAGTTCTGCCTTTGACAAACTAGAGATTGAGTTCCACAGGCTTCTGATAACAAACACAATGCCTCTTTCTTTGGTTTCATTAGCATCATCCATTGGTCAGCATGCCAGCATTACCACACAAGCTTGGCCAGATTCTGTAACAGGGAAGTTGCAGGCCATTGTTGAGAGATTAAATGCTAATGACAGGTTAGACAAGTGTAAATCTATATATGTTGAAGTTCGAGGTATGAATGCTAAGAGGAGTATGGAGACTTTAGATCTGAGTTACCTTGAGTTTTCAACAGCTGAATTTGAGGATTTAAATGTTATTGAGGGTTACATAGACCAATGGGGCTTGCATTTGGAGCTGGCTGTGAAGCACCTGCTTGAGATTGAGTACATTCTCTCTAGCAATGTCTTTGAGAAAATTGGTCCAGAAGCATGGATGGGGTGTTTTGCAAAGATTGCCATTGAATCAGGAATTCTTTCTTTTCTTGAATTTGGAAGGAATGTTACTAGGAGTAAAAATGACCCCTTCAAGTTGTTGAAGCTGCTGGACATATTCCGTGTCTTAAATGGTCTAAGACTAAATTTCAACCAGCTTTTCAATGGGAAAGCTTGTGAAGAAATTAGAACTGTGACAAAGGATCTTATCAACAGAGTTGTCAATGGTGCCAGTGAGATATTCTGGCAACTTCCAACACAAGTGAAGTTATTAAGAACAAGTTCTCCTCCTGCAGATGGCAGTGTTCCTAGGGTGGTAAGCTTTGTAACTGATTACTGCAATCAGCTACTTGGGGATACTTACAGATCACATTTGATACAGGTTCTAGAAATCCATCATAATTGGAGAAATGAAGTATATGAAGAGGGTATTGTTTTCACCCAAATTTATAACATAATTAAGGAAATTGCTATTAATTTAGATGCTTGGTCAAGGGCCTATGAAGATATAACTTTGTCTTACTTTTTTATGATGAACAACCATTGCCATTTCTACAATTTGGGGGGCACTGAGGTTGGGAATCTGATGGGAGATTCTTGGTTAAGAGCACATGAACAGTACAAGGACTACTATGCAGCACTTTATTTGAAGAACAGCTGGGAAAAACTTCTACCTATTCTCAAAGTTCAGAAAGATTTACTTTCATCCTCCGTGACTAGCCAAGATTTGGTCCAGAGACTAAAGGCTTTCAATCTAGCTTTTGATGAAAGGTATAAGAAGCAATCCAATTGGGCAATCACTGATGAGATCATGAGGGAAAATATATGCAAGCATTTGGTGGAAGGCATTGTACCAACCTATAAGACCTATGTGAAGAACTACAGTTTGTCAATAAAAAATTATGCTAAGGCTGCAAAGAATATAAAATATTCAACGCAGAGTTTGGAGAACATGATTAGAACTCTGTTTCAGCCCAAATTGAGGAAGTGTGGGAGAACCAAACAAGCAGACTTGATTAGTAAATTAAAACAAGGGAGCAATCAATTTCGTTTGGCTCTTAATGCACTATAA 2007 0.3886 MESIENLQAARKCLKTSLEKSSAIASALDESGSRLKLLNQRCQSLEAELGPISMQKCLFVDIGDQIDSVLCSSAAVLRVFEAVHQLENSLLIDPSSDLCTYVSDTKKLEEALKLLTDNCNLALGWLQGIFEFFQDKAITNEHCLLNVRKSLRILQELKAMEEGAHLDGGLLSSAFDKLEIEFHRLLITNTMPLSLVSLASSIGQHASITTQAWPDSVTGKLQAIVERLNANDRLDKCKSIYVEVRGMNAKRSMETLDLSYLEFSTAEFEDLNVIEGYIDQWGLHLELAVKHLLEIEYILSSNVFEKIGPEAWMGCFAKIAIESGILSFLEFGRNVTRSKNDPFKLLKLLDIFRVLNGLRLNFNQLFNGKACEEIRTVTKDLINRVVNGASEIFWQLPTQVKLLRTSSPPADGSVPRVVSFVTDYCNQLLGDTYRSHLIQVLEIHHNWRNEVYEEGIVFTQIYNIIKEIAINLDAWSRAYEDITLSYFFMMNNHCHFYNLGGTEVGNLMGDSWLRAHEQYKDYYAALYLKNSWEKLLPILKVQKDLLSSSVTSQDLVQRLKAFNLAFDERYKKQSNWAITDEIMRENICKHLVEGIVPTYKTYVKNYSLSIKNYAKAAKNIKYSTQSLENMIRTLFQPKLRKCGRTKQADLISKLKQGSNQFRLALNAL. 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08259 668 Pfam Exo70 exocyst complex subunit 280 631 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca4g08259 668 Gene3D Exocyst complex component Exo70 135 642 - -
Seca4g08259 668 Coils Coil 28 48 - -
Seca4g08259 668 PANTHER EXOCYST COMPLEX PROTEIN EXO70 143 635 IPR004140 GO:0000145|GO:0006887
Seca4g08259 668 SUPERFAMILY Cullin repeat-like 76 635 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08259 Seca-Chr4 196259028 196261034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08259 3 655 EXO70 exocyst subunit family AT4G31540 49.474 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08259 K07195 - gmx:100777662 959.133