Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08237 ATGGATTTTGATAAAGAAACTATTGGGAGAATACTTGCCCGCTGTCCTGAAATTTTTGCTGCCAGCATTAGTAAAACTCTACAGAGGAAGATTGAGTTCCTTAGTGGGGTTGGCGTCTCTAAAACCTACCTTCCGGTGGTTATCAGAAAGTATCCAGAATTACTTGTGTCTGACATTGACAAAACTTTACTACAACGGTATTGTTCTGACCCATCACTGTTATCTTTTGTTTACTTTTGTTTGAGTATCATATTTGTTTACTCTCACCTAATCAATATTTAG 282 0.3688 MDFDKETIGRILARCPEIFAASISKTLQRKIEFLSGVGVSKTYLPVVIRKYPELLVSDIDKTLLQRYCSDPSLLSFVYFCLSIIFVYSHLINI. 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08237 93 SMART mt_12 45 86 IPR003690 GO:0003690|GO:0006355
Seca4g08237 93 SMART mt_12 9 40 IPR003690 GO:0003690|GO:0006355
Seca4g08237 93 Pfam mTERF 2 66 IPR003690 GO:0003690|GO:0006355
Seca4g08237 93 Gene3D Transcription termination factor 3, mitochondrial 1 80 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Seca4g08237 mTERF 6.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08237 K15032 - gmx:100802127 117.472