Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g08228 | ATGGAACTACGAGGACACTTTCCAGGGAACATATCAGGGCAGGTACCTAATCAAGCAGGGTCTCAATTGCCTGCCACGATTCAACTGAATGGAAATGCCCTCTCTCAGGTGCCAAATTTAGGTGTTTTTTCACACTCAACAATCAATATGGACCCTGAATTTCTTAGAGCACGTACTTTTATGCAAGAGAAGATTAATATACTATTGCAGCGGTACCAGCAGCATCCCATTGCAGAAGTACATAGAAGGAAGGTTAAGGATCTTGCAAAACGCCTGGAGGAGGGCATGTTAAAAGCTGCTATCTCTAAGGAGGACTACATGAACTTGGATACACTAGAGACTCGTTTGTCTAATGTCCTGAGACGATCATCTAACAATCACAACCAACAATATCCACAACTTGTCAGCTCTTCTCCAATTGGTACAATGATACCAACCCCTGGTATGTCGCATGTTACAAATTCAACCATGGTTATTGCTTCTTCTGTGGATGCCTCAATGGTTGCTGCCAGTGGGTTTAATAGCATAGCATCCACATTTGTCAATAGTCCAAGCATGTTACTGGAAGGTGGCATGCTTGGCAGTTATTTGAATAGATCTGATGGTTTGTCTAATGGTTACCAGCAGTCTTCTACCAATTTTTCCATTGGTTCAGGAGGAAACATGTCTTCAGTGGGGGTGCAAAGAAATTCAAGCCAGATGATCCCCACTCCTGGATTTAGTGTCAGCAATAATCATTCATATATGAATGTAGGTCCTTCAACTAATAGCAGTGTTTTTTCCGGTGTTGATTCTACATTGGTATCACAGTCACAGTCCCAGCAGCAGCATCAGAAGCTGCAAGTCAGTGGCCACACCAATCATGTATTGCACAACCTTGGCAATCAAATGGGTAGTGGAATGAGATCTGGTTTACTGCAAAAATCATTTGCACATCCAAATGGTTCTATGAATTCCGGGCTAGGCTTGATTGGAAATAACATACAACATGCAAATGAACCTGGCTCTGATGACTATCCCTCAACTTACACTAATTCCCCTAAACACTTACAGCAGCACTTTGATCAAAATCAGCAACCAGTAGCACAGGAAAGGATAACAATCTCATTGTCAGGTGATGGATATGGATTGAGTAATGTTGACACTTTTGCTTCTGGAAATTTTTATGCATCTGCAACATCCGCTGGGTCTACAATGAACACTCAGAATATGAATTCAGTAACATTGCCATCAATACCCAAAACCAGCTCATTGATAAGTGGTCACTCGAATTTGCACAGTATGCATCAGACTACTCAACAAAAGTCTCAAGCAATTAATGCCTTGGGAAATTTGAATTTTCAATCTTCAAGAGATGGCGTTGTGCATACTCAACAGCAGTATCAGCAGAGACCCCAACAATGTCAACAGTCAGAGCAGTACGCTCAGCAGCAATTTCAGCAGAATCTGCAAAGTCAGCAACCTCACTATTTGGTCAATGGTGATGCCTTCTCTCAGTCTCAGCTCTCTTCCAGTCTAGACAATATAGTGAAGTCTGAGCCTGGAGTTGTTGAACAACATAAAGAAGTTCCCAATTCTCACATTTCTGAACAGTTCCATGTATCTGAGATGCAGAACCAGTTACAGCCGAACTCTTCTGAAGATGGCTCTAGGGTTGCTGAACATCATTCTTTTTCCTCTGCTCAGCATGGTTTAGCCTCATCAACATCTCAAATTTCACAACAAATGTTACACCCACATCAATTGGTTTCCGAGTCTCAAAATAATATTTGCTATCTTTCTGCTGGGTCGCAATCCAAATCCACACTTCTAAATCAATGGCCTCAATCACAAGATGGAAACCACATTCCTGGGAGTATGTCACATGAGCAGCAATTCCACATGGACTTTCACCAAAGAATATCAGGGCAAGGCGAAGCTCAATGCAATAATTTATCATCAGATGGATCTATTATTGGTCAAGGTGTTGTTTCTAGAAGCTCAGCTGAGCCGCTAGACTCAAGCAGTAATATCACGAAGTCACACAGGAATCAACAGAGGTGGCTTTTATTTTTACTTCATGCTCGACGATGTTCTGCCCCAGAAGGGCGATGCCAAGAACGCCATTGTTCTAGTGCACAGAAGTTGTGTAATCACATAGATGGATGCAATTTACCTCGTTGTCCATATCCTCGTTGTCATCATACCAGAGAATTGCTTCACCATTTCATAAAATGCAAGGATCCATGTTGCCCTGTTTGTGTTTTGGTAAGAAAGTATCGACGTGCATTTCAAGTTAAGCCCCAGATTCGGCCAGATCCTGAATCAGGTTTACCAATTGCTTCAAACGCATCCTGTAAATCCTATAACATAGTAAGCCCATCACCTAGGTTGATCTCAAAGTCTCCACTAGTGGTTGAAACATCGGAAGACCTGCACCCATCTTTAAAACGTATGAAAATTGAGCAATGCACCCAGTCCATTAATCCTGAATATGGCAATTCTGCTTCATCTGTTCCTCTAAAGTGTGAATCACGAGATTTCAAGGATACTCAATGCCAAGCCTTTCCCCGTGGTGACATGTCTATGTCAACTAAATCTGAGCTTACAGAAGTTAAGGCAGATGTTCTGGTGCATTCAGTAGATGAAAATCTTAATGAGATGAAAATGGATGAGGATAGTGCAGATGAAAAAAGGCCTGCTGGTGAGCCTGTCTCATATGATGATTCTGCTAATATAACTAGGCCAGAAAATATTAAAACTGAGAAAGAAACTGGACAAGATAAGCAAGAAAATGTGACCCTACCATCTGAAAATGCAGCTGGAACCAAGTCTGGTAAGTCAAAAATAAAGGGGGTCTCAATGACTGAACTGTTTACTCCAGAGCAAGTCAGGGAACATATCAAAAGCCTCAGGCAATGGGTTGGCCAAAGCAAATCAAAAGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAATTCCTGTCAATTGTGTGCTGTAGAGAAGCTTACTTTTGAACCACCACCTATTTATTGCACAACGTGTGGTGTTCGCATTAAACGAAATAATATGTATTATACCATGGGTACTGGTGATACACGGCATTATTTTTGTATTCCCTGCTATAATGAGCCTCGTGGAGACACCATTGTTGTTGATGGGACTCCTTTTCCTAAGTCAAGATTGGAAAAGAAGAAAAATGATGAGGAAACAGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAACATCAAATTTGTGCCTTATTTAATGGTCGAAGAAATGATGGTGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAAGTAGAAAGAGGTGAGCGCAAGCCCTTACTGCAAAATGCTGTTCTTGGAGCCAAGGATTTGCCGAGAACAATTCTAAGTGACCACATAGAGCAACGGTTATTTAGGCGACTAAGGCAAGAAAAACAAGAGAGGGCCAGGATTCAAGGGAAAAGTTATGATGAGGTGCCCAGTGCTGAATCACTTGTTATAAGAGTTGTGTCATCTGTTGACAAAAAATTAGAAGTTAAACCGCGTTTTTTGGAGATTTTTCAGGAAGAAAATTACCCAGCAGAATTCCCATATAAATCAAAGGTAGTTTTGTTGTTCCAGAAAATTGAAGGTGTTGAAGTATGCCTCTTTGGCATGTATGTTCAAGAATTTGGATCTGAATGCCAATTTCCGAATCAGCGTCGGGTTTATCTTTCATATCTGGACTCTGTCAAGTATTTTAGGCCAGAGGTTAAAGCAGTTACTGGAGAGGCACTTCGGACATTTGTTTACCATGAAATTCTGATTGGATACCTTGAGTATTGCAAGAAACGTGGTTTTACAAGCTGCTATATATGGGCATGTCCTCCATTAAAGGGTGAAGATTATATTTTATATTGTCATCCAGAAATTCAGAAAACACCAAAATCTGATAAACTTAGGGAATGGTACCTGTCCATGTTAAGAAAAGCTGCCAAGGAGAATATTGTTGTTGGTCTCACCAACTTATACGACCATTTCTTTGTATCTACTGGGGAATGTAAGGCTAAGGTTACAGCTGCAAGGCTCCCATATTTTGACGGTGACTATTGGCCTGGGGCTGCTGAGGATTTGATTTATCAGATTCGCCAAGAGGAAGATGGAAGAAAAAATAATAAGAAAGGAACAACCAAAAAGACTATAACAAAAAGGGCTTTAAAAGCATCTGGTCAGTCTGATCTTTCTGGAAACGCCTCAAAAGATCTGCTCCTAATGCACAAACTCGGTGAAACCATTTCCCCAATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCATGCACTCATTGTTGTATTCTAATGGTGTCTGGCAACCGTTGGGTTTGCAACAACTGCAAGAATTTTCAGATTTGTGATAAGTGTTATGAAGTAGAACTAAAGCGTGAAGAGAGAGAACGGCATCCAATTAATCAGAGGGAGAAACATACCCTTTATCGTGTTGAAATTACTGATGTACCTGCCGATACAAAGGACAGAGATGAGATTCTTGAGAGTGAGTTCTTCGACACTAGACAAGCATTTTTGAGTCTCTGCCAGGGGAACCATTATCAATATGATACACTAAGGCGGGCCAAGCATTCCTCAATGATGGTTCTCTATCATCTTCATAATCCAACTGCTCCTGCATTTGTTACAACATGTAATATATGCCATCTTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCTGAGTATGATGTATGCAATGCTTGTTATCAAAAGGAGGGGGGCACTGATCATCCTCATAAATTGACAAATCATCCATCAATGGCAGATCGTGACGCTCAGAACAAAGAAGCAAGGCAACTTCGAGTGTTACAGCTACGGAAAATGCTTGATCTTCTTGTGCATGCATCTCAATGTCGGTCTGCACATTGCCAATATCCAAATTGTCGCAAGGTGAAGGGGCTTTTCCGTCATGGAATGCATTGCAAAGTACGTGCATCCGGAGGCTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCCCGTGCTTGTAAGGAATCTGAATGCCATGTACCTCGTTGCAGGGATTTAAAAGAACATTTAAGGAGGTTGCAGCAACAGGCTGATTCAAGGCGAAGAGCTGCTGTGATGGAGATGATGAGGCAGAGAGCTGCAGAAGTTGCCAACAATGCTGGATGA | 5217 | 0.4146 | MELRGHFPGNISGQVPNQAGSQLPATIQLNGNALSQVPNLGVFSHSTINMDPEFLRARTFMQEKINILLQRYQQHPIAEVHRRKVKDLAKRLEEGMLKAAISKEDYMNLDTLETRLSNVLRRSSNNHNQQYPQLVSSSPIGTMIPTPGMSHVTNSTMVIASSVDASMVAASGFNSIASTFVNSPSMLLEGGMLGSYLNRSDGLSNGYQQSSTNFSIGSGGNMSSVGVQRNSSQMIPTPGFSVSNNHSYMNVGPSTNSSVFSGVDSTLVSQSQSQQQHQKLQVSGHTNHVLHNLGNQMGSGMRSGLLQKSFAHPNGSMNSGLGLIGNNIQHANEPGSDDYPSTYTNSPKHLQQHFDQNQQPVAQERITISLSGDGYGLSNVDTFASGNFYASATSAGSTMNTQNMNSVTLPSIPKTSSLISGHSNLHSMHQTTQQKSQAINALGNLNFQSSRDGVVHTQQQYQQRPQQCQQSEQYAQQQFQQNLQSQQPHYLVNGDAFSQSQLSSSLDNIVKSEPGVVEQHKEVPNSHISEQFHVSEMQNQLQPNSSEDGSRVAEHHSFSSAQHGLASSTSQISQQMLHPHQLVSESQNNICYLSAGSQSKSTLLNQWPQSQDGNHIPGSMSHEQQFHMDFHQRISGQGEAQCNNLSSDGSIIGQGVVSRSSAEPLDSSSNITKSHRNQQRWLLFLLHARRCSAPEGRCQERHCSSAQKLCNHIDGCNLPRCPYPRCHHTRELLHHFIKCKDPCCPVCVLVRKYRRAFQVKPQIRPDPESGLPIASNASCKSYNIVSPSPRLISKSPLVVETSEDLHPSLKRMKIEQCTQSINPEYGNSASSVPLKCESRDFKDTQCQAFPRGDMSMSTKSELTEVKADVLVHSVDENLNEMKMDEDSADEKRPAGEPVSYDDSANITRPENIKTEKETGQDKQENVTLPSENAAGTKSGKSKIKGVSMTELFTPEQVREHIKSLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGTGDTRHYFCIPCYNEPRGDTIVVDGTPFPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLLQNAVLGAKDLPRTILSDHIEQRLFRRLRQEKQERARIQGKSYDEVPSAESLVIRVVSSVDKKLEVKPRFLEIFQEENYPAEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAAKENIVVGLTNLYDHFFVSTGECKAKVTAARLPYFDGDYWPGAAEDLIYQIRQEEDGRKNNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACTHCCILMVSGNRWVCNNCKNFQICDKCYEVELKREERERHPINQREKHTLYRVEITDVPADTKDRDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICHLDIETGQGWRCEVCPEYDVCNACYQKEGGTDHPHKLTNHPSMADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKVRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQADSRRRAAVMEMMRQRAAEVANNAG. | 1739 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g08228 | 1738 | ProSiteProfiles | Zinc finger ZZ-type profile. | 1560 | 1613 | IPR000433 | GO:0008270 | |
Seca4g08228 | 1738 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1057 | 1105 | IPR013083 | - | |
Seca4g08228 | 1738 | ProSitePatterns | Zinc finger PHD-type signature. | 1033 | 1104 | IPR019786 | - | |
Seca4g08228 | 1738 | FunFam | Histone acetyltransferase HAC1-like protein | 1617 | 1734 | - | - | |
Seca4g08228 | 1738 | SUPERFAMILY | RING/U-box | 1541 | 1609 | - | - | |
Seca4g08228 | 1738 | ProSiteProfiles | Zinc finger TAZ-type profile. | 1620 | 1703 | IPR000197 | - | |
Seca4g08228 | 1738 | FunFam | Histone acetyltransferase of the CBP family 12 | 1436 | 1495 | - | - | |
Seca4g08228 | 1738 | MobiDBLite | consensus disorder prediction | 536 | 580 | - | - | |
Seca4g08228 | 1738 | Pfam | PHD-finger | 1063 | 1105 | IPR019787 | - | |
Seca4g08228 | 1738 | Gene3D | TAZ domain | 1617 | 1734 | IPR035898 | - | |
Seca4g08228 | 1738 | Gene3D | - | 1436 | 1496 | IPR043145 | - | |
Seca4g08228 | 1738 | MobiDBLite | consensus disorder prediction | 908 | 922 | - | - | |
Seca4g08228 | 1738 | SUPERFAMILY | TAZ domain | 674 | 754 | IPR035898 | - | |
Seca4g08228 | 1738 | MobiDBLite | consensus disorder prediction | 555 | 580 | - | - | |
Seca4g08228 | 1738 | Gene3D | TAZ domain | 666 | 755 | IPR035898 | - | |
Seca4g08228 | 1738 | SUPERFAMILY | TAZ domain | 1622 | 1705 | IPR035898 | - | |
Seca4g08228 | 1738 | PANTHER | CBP/P300-RELATED | 84 | 374 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
Seca4g08228 | 1738 | SMART | TAZ_2 | 1623 | 1701 | IPR000197 | - | |
Seca4g08228 | 1738 | SMART | TAZ_2 | 671 | 750 | IPR000197 | - | |
Seca4g08228 | 1738 | Pfam | TAZ zinc finger | 679 | 747 | IPR000197 | - | |
Seca4g08228 | 1738 | Pfam | TAZ zinc finger | 1630 | 1700 | IPR000197 | - | |
Seca4g08228 | 1738 | CDD | PHD_HAC_like | 1032 | 1104 | - | - | |
Seca4g08228 | 1738 | ProSiteProfiles | CBP/p300-type histone acetyltransferase (HAT) domain profile. | 1122 | 1558 | IPR031162 | GO:0004402 | |
Seca4g08228 | 1738 | MobiDBLite | consensus disorder prediction | 877 | 942 | - | - | |
Seca4g08228 | 1738 | FunFam | Histone acetyltransferase HAC1 | 1559 | 1610 | - | - | |
Seca4g08228 | 1738 | Gene3D | - | 1559 | 1611 | IPR043145 | - | |
Seca4g08228 | 1738 | SUPERFAMILY | FYVE/PHD zinc finger | 1066 | 1106 | IPR011011 | - | |
Seca4g08228 | 1738 | ProSiteProfiles | Zinc finger ZZ-type profile. | 1440 | 1503 | IPR000433 | GO:0008270 | |
Seca4g08228 | 1738 | Pfam | Zinc finger, ZZ type | 1562 | 1603 | IPR000433 | GO:0008270 | |
Seca4g08228 | 1738 | ProSitePatterns | Zinc finger ZZ-type signature. | 1565 | 1592 | IPR000433 | GO:0008270 | |
Seca4g08228 | 1738 | Coils | Coil | 1700 | 1720 | - | - | |
Seca4g08228 | 1738 | SMART | KAT11_2 | 1155 | 1452 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
Seca4g08228 | 1738 | MobiDBLite | consensus disorder prediction | 877 | 897 | - | - | |
Seca4g08228 | 1738 | MobiDBLite | consensus disorder prediction | 923 | 937 | - | - | |
Seca4g08228 | 1738 | Pfam | Histone acetylation protein | 1162 | 1378 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
Seca4g08228 | 1738 | ProSiteProfiles | Zinc finger TAZ-type profile. | 670 | 750 | IPR000197 | - | |
Seca4g08228 | 1738 | SUPERFAMILY | RING/U-box | 1420 | 1492 | - | - | |
Seca4g08228 | 1738 | SMART | zz_5 | 1559 | 1605 | IPR000433 | GO:0008270 | |
Seca4g08228 | 1738 | SMART | zz_5 | 1439 | 1483 | IPR000433 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g08228 | Seca-Chr4 | 195395314 | 195410136 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TAZ | Seca4g08228 | HAT_KAT11 | 6.4e-32 | CL0257 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g08228 | K04498 | - | gmx:100809207 | 2791.53 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Seca4g08228 | 4 | 195395314 | 195410136 | Seca4g08228 | 4 | 195395314 | 195410136 | ECH |