Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08197 ATGATAATGAACAAACAAAGGCACCGACAATTGTGGCTAAGGAGCAACAACAATATGAGCCAAAAATTGGCATGGTGTTTTCAAATGAAGATGAAGCTTATGAGTTTCTATAATAATTATGCTAAATTTATTGGGTTTACTGTGAGAAAAAACCAGTATCGAAGATTGGCAGATGGAACCATAAGCCAGAGAACATTTGTTTGTGGAAAAGAGGGATATAGAAAGCCGAAGAACCCTTCACATGTGAACAAGATTAATAGGAGAGAAACAAGAACCGGTTGTCAAGCTATGATATGCTTTAAAATTGAGAAGGATGCTTGGATTATTTCTAAATTCATTCCTGATCATAATCATGATCTTGTGAAATCTTCAGCACGAGCTATGATGAGATCACAAAGGCATGTAGATGAGGCTCATGCCAATATAATTGAAGATATGGACAATGCCGGTATAAAACCGTGTGGTATGTACTCATATTTTGTTGAGGTTGCTGGAGGAGCACATAATGTTGGATTTTTAAAATTTGATTGTGACAATTTTTTACAAAGCAAGAGAAGCAACACTCTTGAAGCAGGAGATGCACAAAGTGTTATTAATCACTTTAAAAGTTTACAAGCAAATGATCCATCTTTCTTCTACACAATCCAAGTAGATTGTGAAAATCCTATGACTAATTTTTTTTGA 684 0.3494 MIMNKQRHRQLWLRSNNNMSQKLAWCFQMKMKLMSFYNNYAKFIGFTVRKNQYRRLADGTISQRTFVCGKEGYRKPKNPSHVNKINRRETRTGCQAMICFKIEKDAWIISKFIPDHNHDLVKSSARAMMRSQRHVDEAHANIIEDMDNAGIKPCGMYSYFVEVAGGAHNVGFLKFDCDNFLQSKRSNTLEAGDAQSVINHFKSLQANDPSFFYTIQVDCENPMTNFF. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08197 227 Pfam FAR1 DNA-binding domain 35 121 IPR004330 -
Seca4g08197 227 PANTHER OS01G0519700 PROTEIN 20 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08197 Seca-Chr4 194470716 194471399 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g08197 FAR1 2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08197 - - rcn:112203823 195.282