Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08118 ATGAGTGAGATGGACTTTAATAGTGATGATTCAGCTGTTAATCTGGATGATGATAGGGACATAAGTTATAGTGACTCTTCTAGCAGTCATGAAATGACTAGTGAGGCTGATATGGATGAGGAGAATGATGTTATGGATACTGATGTTAGAGACGGTGTGTCAAGGAGGATAATTGACTTGACAAATGATGATATAAGGGCTTTGGAGTTCGCTAGTGAAGATCATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTAAAGGATTTGCTATGAGGAAGGATGATGTCATTCGAGACAAAAAAGGGATGGTCATAATGCGGCAGTATTTATGTAGTAGGGCTGGTATGAGGGACAAAAAGCATTTGATTAGGTTAGATCGGGAAAAGGAACACAGACCCCTTACCCATACCAATTGTCTAGCAAAGTTGAGAGTTAGGTTTGATTACAAGACGGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACCTCTAATTCCTAATTATAGGGGATTGACTGATGGGGACAAAGCCCAAGTGAATGCATTACATTCTCATGGCATTAGGCCTTGCCAGATTATGGGTTTTCTTGTTGATAAAAAAGGAGGGTATAAAAATGTTGGATTTTCAAAGAAGATTTGTACAACTACATAG 684 0.3816 MSEMDFNSDDSAVNLDDDRDISYSDSSSSHEMTSEADMDEENDVMDTDVRDGVSRRIIDLTNDDIRALEFASEDHAFNFYFSYAKCKGFAMRKDDVIRDKKGMVIMRQYLCSRAGMRDKKHLIRLDREKEHRPLTHTNCLAKLRVRFDYKTGKWKVVSFEESHNHDLTPAKFVPLIPNYRGLTDGDKAQVNALHSHGIRPCQIMGFLVDKKGGYKNVGFSKKICTTT. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08118 227 MobiDBLite consensus disorder prediction 1 42 - -
Seca4g08118 227 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 223 - -
Seca4g08118 227 Pfam FAR1 DNA-binding domain 78 168 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08118 Seca-Chr4 191239581 191240309 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g08118 FAR1 2.8e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08118 - - ccaj:109794460 230.72