Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08082 ATGGGAAACTCCCAATCCCCTTCTGTTGCATCCCTCTCTTCAAGAAGTCCCAACTTGCCAAGTCCTGATATTTTGAAACCAGATATCATAGGACCGGGTGAGAACATCCTAGTTGCCTGGCCATTCCCCCTGGATAACAGCACCAATTCAAAACTGAATTTCAACATCATGTCTGGCACATCAATGTCATGCCCACATCTTAGCGGCATTGCTGCTTTGCTCAATATTTAA 231 0.4502 MGNSQSPSVASLSSRSPNLPSPDILKPDIIGPGENILVAWPFPLDNSTNSKLNFNIMSGTSMSCPHLSGIAALLNI. 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08082 76 SUPERFAMILY Subtilisin-like 5 75 IPR036852 GO:0004252|GO:0006508
Seca4g08082 76 MobiDBLite consensus disorder prediction 1 26 - -
Seca4g08082 76 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 74 IPR045051 -
Seca4g08082 76 MobiDBLite consensus disorder prediction 1 20 - -
Seca4g08082 76 Pfam Subtilase family 6 74 IPR000209 GO:0006508|GO:0008236
Seca4g08082 76 ProSiteProfiles Serine proteases, subtilase domain profile. 1 76 - -
Seca4g08082 76 Gene3D Peptidase S8/S53 domain 3 74 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08082 Seca-Chr4 190204506 190204736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08082 1 75 Subtilisin-like Serine Gene Family AT1G04110 51.220 1.65e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08082 - - gmx:100812208 116.316