Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08066 ATGAAGAAGTATTTTGAGCAATTTGGTGAGATCTTGGAGGTTGTTGTCATCACTGACAAAGCCACTGGAAGATCTAAAGGCTATGGATTTGTATGCTTAATCCTTATTCCTTCCTTAATTCATTCATTAATTATCTTCTCTTCTCTCTATCACATCATATATATCATGTGTATGCATGTCCTTCCTATATATATGAATCCTCATCATATCATTATATCATATATTCTAGTCTTTATTATAGCTAGATCTCAAGTCTAA 258 0.3178 MKKYFEQFGEILEVVVITDKATGRSKGYGFVCLILIPSLIHSLIIFSSLYHIIYIMCMHVLPIYMNPHHIIISYILVFIIARSQV. 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08066 85 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 31 IPR000504 GO:0003723
Seca4g08066 85 Gene3D - 1 32 IPR012677 -
Seca4g08066 85 PANTHER BOULE-RELATED 1 31 - -
Seca4g08066 85 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2 31 IPR000504 GO:0003723
Seca4g08066 85 SUPERFAMILY RNA-binding domain, RBD 2 32 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08066 Seca-Chr4 189609169 189609426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08066 1 31 C2H2 Transcription Factor Family AT2G19380 61.290 4.56e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08066 - - cill:122302324 67.3958