Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08065 ATGGATGGAAGGCTTGGAGATTTTGGGTTAGCCAGAATGCACAGCCATGGTCAAATTTCTAGCACCTCAAAATTGGTTGGAACAGTTGGGTACATGGCTCCTGAAGTGATTAGGACTGGATGA 123 0.4553 MDGRLGDFGLARMHSHGQISSTSKLVGTVGYMAPEVIRTG. 41
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08065 40 ProSiteProfiles Protein kinase domain profile. 1 40 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g08065 40 Gene3D Transferase(Phosphotransferase) domain 1 1 40 - -
Seca4g08065 40 SUPERFAMILY Protein kinase-like (PK-like) 4 40 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08065 Seca-Chr4 189605063 189605185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08065 1 40 Receptor kinase-like Gene Family AT3G45430 62.500 2.36e-13 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca4g08065 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08065 - - gsj:114386544 78.1814