Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca4g08063 | ATGGAGACATTTTCCACGGTTTCAATCTGTGTTCAGACAGTGATTGTTGCTGTGATTCCAATATGGGGATGGTTGATGCTTAACTCGTTGTGGCTGAGGCCAAAGAGGTTGGAAAAGCTTCTTAGAGCACAAGGTCTTCAAGGCGAGTCTTATAAGCTTTCTTCACTTGATGACTCGAAGCAAAAGCATATGCTGAAAATGCAACAAGAAGCCAAATCCAAACCAATTGCTCTTTCCAATGATGTTGCTCCACAAATCTTCACCTCTGTTTACCAAACTATCAACCAATATGGCAAGAATTCCTTTTTATGGGAAGGTACAACACCAAAGGTGATCATCACAGAGCCAGAACAAATCAAAGAAGTCTTTAATAAGATCCATGACTTCTCTAAACCAAAGTTCAATTCCGTTATCAATCTTTTGAACGTTGGCCTGGTACAATATAACGGTGAAAAATGGGCTAAACATCGAAAGATTGTTAACCCTGCATTCCATCTCGATAAATTAAAAATGATTTACTTCACACTTGATTATTTACAGAATATGCTGCCTGCATTTTTAGAAAGCGGCCATGATATGATTAGCAAGTGGAAGGAAATGTTGTCATCAGATGGAACATGTGAAATTGATGTTTGGCCTTTCCTTCAGAATTTGACTTGTGATGTAATTTCTAGAACAGCATTTGGAAGTAGCTATGCAGAAGGAACAAAAATTTTTGGACTTTTGAGAAGGCAGGGATATCTTTTAATGACAGCAGTGCACACGCACATTCCAATGTGGTGGCTTCTACCAACAAGTACCAAAAGGACGATGAAGGAAATGGATAGAGATATTTATAATTCAGTGGAGGGTATCATTAAAAAACGAGAGACTGCTATGGAGAATGGAGAAGCCATCAAAGATGATTTATTAGGCATACTTTTGGAATCAAATCACATTGAAAATCAAGGACATGAAAACAGTAAGACTGGTGGAATGACCAATGAAGAAGTAATGAAGGAATGCAAGGCATTCTACAATGCAGGGCAAGAGACCACTTCAACTTTGTTGGTTTGGACAATGATTTTATTGGCTAGGCATCCTGAATGGCAAGCACGTGCAAGGGAGGAAGTTTTGCAAGTTTTTGGCAACCAAAATCCAAACTTTAATGGGTTAAGTCAACTTAAAATTGTGACTATGGTTTTATATGAGGTTCTCAGGTTATATCCACCAACAATTTACTTCACTCGAGCTGTTGAAAAGGATTTGAAACTTGGAAACCTATCATTACCTGCAGGAATACAGGTTTCCATACCCATACTTTTGCTTCACCATGATCGTGATATATGGGGTGATGATGCAAAGCAGTTCAAACCTGAAAGATTCTCAGAAGGAATTGCAAAGGTCACAAAAGGTCAAGTTTCATATTTCCCATTTGGATGGGGTCCTAGAATATGCATTGGGCAAAACTTTGCCTTATTGGAAGCTAAAATAGTATTGTCATTGCTTCTGCAAAATTTCTCATTTGAGCTTTCTGCGGCCTATACACATGCTCCCACCGCTGTGCTTTCTTTGCAGCCAAAACATGGGGCGCAACTCGTTCTGCATAAATTGGAATGA | 1599 | 0.3896 | METFSTVSICVQTVIVAVIPIWGWLMLNSLWLRPKRLEKLLRAQGLQGESYKLSSLDDSKQKHMLKMQQEAKSKPIALSNDVAPQIFTSVYQTINQYGKNSFLWEGTTPKVIITEPEQIKEVFNKIHDFSKPKFNSVINLLNVGLVQYNGEKWAKHRKIVNPAFHLDKLKMIYFTLDYLQNMLPAFLESGHDMISKWKEMLSSDGTCEIDVWPFLQNLTCDVISRTAFGSSYAEGTKIFGLLRRQGYLLMTAVHTHIPMWWLLPTSTKRTMKEMDRDIYNSVEGIIKKRETAMENGEAIKDDLLGILLESNHIENQGHENSKTGGMTNEEVMKECKAFYNAGQETTSTLLVWTMILLARHPEWQARAREEVLQVFGNQNPNFNGLSQLKIVTMVLYEVLRLYPPTIYFTRAVEKDLKLGNLSLPAGIQVSIPILLLHHDRDIWGDDAKQFKPERFSEGIAKVTKGQVSYFPFGWGPRICIGQNFALLEAKIVLSLLLQNFSFELSAAYTHAPTAVLSLQPKHGAQLVLHKLE. | 533 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca4g08063 | 532 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 22 | 524 | - | - | |
| Seca4g08063 | 532 | PRINTS | E-class P450 group I signature | 218 | 236 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g08063 | 532 | PRINTS | E-class P450 group I signature | 479 | 502 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g08063 | 532 | PRINTS | E-class P450 group I signature | 330 | 347 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g08063 | 532 | PRINTS | E-class P450 group I signature | 94 | 113 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g08063 | 532 | PRINTS | E-class P450 group I signature | 350 | 376 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g08063 | 532 | PRINTS | E-class P450 group I signature | 469 | 479 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g08063 | 532 | SUPERFAMILY | Cytochrome P450 | 85 | 529 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g08063 | 532 | PRINTS | P450 superfamily signature | 470 | 479 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g08063 | 532 | PRINTS | P450 superfamily signature | 393 | 404 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g08063 | 532 | PRINTS | P450 superfamily signature | 341 | 358 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g08063 | 532 | PRINTS | P450 superfamily signature | 479 | 490 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g08063 | 532 | Gene3D | Cytochrome P450 | 78 | 530 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g08063 | 532 | FunFam | Cytochrome P450 734A1 | 31 | 532 | - | - | |
| Seca4g08063 | 532 | Pfam | Cytochrome P450 | 89 | 505 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Seca4g08063 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 472 | 481 | IPR017972 | GO:0005506|GO:0016705 | |
| Seca4g08063 | 532 | CDD | CYP72 | 90 | 527 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca4g08063 | Seca-Chr4 | 189452538 | 189456157 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Seca4g08063 | 5 | 531 | Cytochrome P450 | AT3G14690 | 51.040 | 0.0 | 560 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca4g08063 | - | K17873 | ag:BAL45207 | 786.949 |