Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08053 ATGCAGGTAACATTGATTCACCTAGAGGATAAGCCTCGTCGAGGGGTTTTTAATGTTATTCAAGAATTGAAAGATGAAGCAAAGTTTCATGTGATGATGTTGACCGCACTTGCAGCTGCAACTGTTGGGATTGTTCTTGTTCATCGTGCTAGTGAAACTGCCATAGCTGTTGCCGATGTGTTGTTGCTTCGAGAAAATATTTCTGCAGTGCCATTTTGTATTGCCAAATCTCGCCGAACAACCTCAATGCAAAATGTAGCTCTGGCATTGCCATGCATTGTCATGGCTTCCCTTCCGTTTGTTTTGGGATTTCTGCCATTGTGGTTGACGGTATGA 336 0.4315 MQVTLIHLEDKPRRGVFNVIQELKDEAKFHVMMLTALAAATVGIVLVHRASETAIAVADVLLLRENISAVPFCIAKSRRTTSMQNVALALPCIVMASLPFVLGFLPLWLTV. 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08053 111 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 3 35 - -
Seca4g08053 111 Gene3D - 34 94 IPR023214 -
Seca4g08053 111 SUPERFAMILY HAD-like 35 110 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08053 Seca-Chr4 189057746 189058308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08053 1 111 Primary Pumps ATPases AT4G37270 47.305 4.34e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08053 K01534 - gmx:547503 140.584