Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g08051 | ATGCCTTCCTTAAGTTGCTCGTCCAGAAACGAGGAATCTGAATCGAGATCTAATCCCAATCCAAAGTGGATCTACGATGTGTACTTGAGCTTCTGTGCCAAAGACACAGCCTCTTTTGCTTCACATCTCTATACCACTCTTAGTAAAAATTCTGGAGTTTCTGTTTTCTGGGACGACTATGACAGGCTTGGAAGTGGAGATCAGATAACACCCTCGGTGCATCTTGCAATCGGAGGGTCTAGAATTTCCATCATCGTTTTCTCAAGAAATTATGCTAATTCGAGATGGTGTCTTCAAGAGTTGGAGAAAATAATGGAGTGTCGCAGAACCATAGGTCAGATGGTTCTTCCTCTGTTCTGTGATGTACATCCTTCCGATGTACGTGGGCAGAGAGGTGTGTTTGGTGAGGCTTTTAAAGATCTTGTACAAAGAATCTTTTTGGAGGAAACCTGGGAGGAGGAAGACAAGTTCATAAGTTGGGTGGCAGCGCTCAGTGAAGCTAGCAAAATTTCAGGACATGTCTTCATGGGTTCCAGATTTGTCGGCATCCTGCGTTTGAGTCGGAAGAAATTGTCAGAATTATCTGATATCAGAAAACGTGGAAGCCACTTATGTGATTATTCTTTTAAGAAATTTGCAAGTATTATATTACTCGTTGAAGACTTTTCCAAAACACTATTACGAAACCTCCATTCTGCAACTGCAACGAAGAAATTCTTTGTCGCTGTTGAGGAGATTCTCTGCAACTGCGAATCCTACATTCTGGAACGCAAGTCTGCCGTTGCCGCCCGCATTGAGGAGAAGAAGGAAGCCGGTCTTGTTGGGCTCCGAAGTTCCATCTCCGAAATTCTGCTCGCTGCCGTTGTTGCGGTTCATCGCTTCCAGGAAGCGCCGAAATTCTGCTCCGGAATTCTGACTGTAAGGAACGAAAATGAAGATATTAAGAATATAGTTGAACATGTGACTCATGTGCTAGACAAGAGAGACTTATTCGTTGCTAACCATCCAGTGGGAGTAGAATCTCGTGTGCAAGATGTGGTTCAACTATTGAACAACCAACAATCAAAATATCCTCTACTATTAGGGATTTGGGGTATGGCAGGGATTGGTAAAACAACCATTGCCAAAGCCATTTATAATCAAATTGGTCGCCATTTTGAGGACAAGAGCTTCCTCCTTAATATCCGGGAAGTTTGGAAACAAAATAATGGCCAAGTTTCTTTACAAGAGAGGCTTCTTTTTGATATCTACAAAACAATGAAAATAAAGTTACATACAACTGAAGCAGGAAAAATGATATTAAAAGAAAGGCTTCATCACAAAAGAATACTTCTTATACTTGACAATGTGAATAACTTGGAGCAGCTAAATGCATTATGTGGAAGTCGTGAATGGTTTGGTTTAGGTAGCAAAATAATCATAACGACAAGAGATAAACATCTACTTAGGATGATTGGAGTTGATCATGTATATAAAGTGGTAGAACTAGAGCAAAGTGAATCTCTTGAGCTTTTTAGTTGGCATGCGTTCAAGCAAGGATGTCCTAAAGAAGACTTTGTTGAACTTTCTCAAGAATTAGTTGCTTATTCTGGTGGATTACCATTTGCTCTAGAAGTCCTTGGGTCCATTTTGTTTGAAAAGGTAACATCAGAGTGGGAGAGTATGTTGCAGAAACTCAAAAGAATTCCCAATAGGGAAATACAAAATGTTCTAAAAGTGAGTTTTGATGATTTAAATGATAAAGAGAAAAAAATATTCCTTGATATAGCATGTTTCTTTATTGGGATGGACCGGGATAATGTGATACATACATTAAATAGGTCAATACAATTCGCAGCACTTCAAGTAAGTTTCCTTGAAGACAAAAGCCTTGTAACCATTGGTGAGAATAACAAACTTGGAATGCACGTTCTATTGAGAGACATGGCAAGGGAAATTATTATGAAGGAATCACGAATTAAACCTGAGCCAAGGATCTATGATGTATTCTTGAGTTTCAGAGGGGAAGACACCCGTGCATCATTCACTTCACATCTTTATGTCGCTCTACAAAATGAAGGTATATATGTTTTCAGGGATAATGATGAGATTCAAAGGGGAGAGCAGATCTCAGTCTCACTATTGCAAGCAATCAGAAGGTCTAGAATATGTGTCATTGTTTTATCAAGAAACTATGCTAATTCAAGATGGTGTATGCAAGAGTTGGAGAACATAATGGAAAGTCGTAGAGCCACAGGTCTGGTGGTTGTGCCAGTGTTCTATGGAGTTGATCCCTCAGATGTACGTCATCAAACAGGTAAATTTGGAGAAGCTTTTGAAGATCTTATTACAAGTGTCTCAATGGATGAATATAGGGTGAGGAATTGGAGGTTAGTGCTCCTTGAAGTTGGTGGCATAGCAGGCTTTGTCTTCATAGATTCCAGGAATGAAAGTGCGGATATCAAGAATATTGTTGAACATGTTACCCGTTTGTTAGATAGGACAGAACTATTCGTTGCTGAACATCCAGTGGGAGTAGAATCTCGCGTGCAAGTTGTGACTAAACTATTAAACATGCAACAATCAAAAGATGTTTTACTTGTAGGGATTTGGGGGATGGGAGGTATTGGTAAAACAACCATTGCCAAAGCCATCTATAATCAAATTGGGAGCAATTTTGAGGGTAGGAGTTTCCTCCCAAATATCAGGGAAGTTTGGGATCAGAAAGATACTAACAGAGTTTCTTTACAACAACTTGTTCTTTATGATATTTTCAAAACAACAACATTGAAGATACAAAACATTGAATCAGGGAAAAATATATTAAAGGAAAGACTTTCCCATAAAAAGGTACTTGTTGTGCTTGATGATGTGAATGAATTAGACCAACTAAATGCTTTGTGTGGAAGCCGTGAATGGTTTGGTCCAGGGAGTAGAATAATCATCACAACAAGAGATAAGCGTCTTCTTAGATTGCGTAGAGTTGACCATGTATATAGAATGGAAGAAATGAACGAGAGTGAATCTCTTGAGCTTTTTAGTTGGCACGCATTTAAGGAAGCAAGTCCAAGAGAAGATTTTGCTACACATTCAACAAACGTGGTTGCTTATTCTGGAAGATTGCCACTAGCACTTGAAGTCCTTGGGTCATGTTTGTTTGACAGGGGAATAACAGAGTGGGAGAGTGTGTTGGAGAAACTCAAAAGAATTCCAAACGATCAAGTACAGAAGAAGCTGAAAATAAGCTACGATGGTTTAAGTGATGATACTCAGAAGGAAATATTTCTTGACATTGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTTATACATATATTAAATGGTTGTGGACTTTACCCCGAAATTGGAATTAGTGTCCTTGTAGAGCGAAGCCTTGTAACTGTTGACAATAAAAACAAGCTTGGAATGCATGATTTGTTGAGAGACATGGGAAGAGAAATAATTCGTGAGAAATCACCTAATGAGCCTGAGGAGCGTAGTAGGTTATGGCTTCGAGAGGATGTGCTTGATGTATTGTCAAAGCATAAGGGGACAAAAGCTGTCAAGGGATTGAGTTTGAGATTGACTGGAAAAAATACAATTTGTTTGAATACCAAAGCATTTGATAAGTTGAATAGACTCAGATTACTTCAACTTGCTGGTGTGAGACTTAACGGAGATTTTAAGCATCTTGCAGGAGATCTTAGATGGTTGTGCTGGCGTGGTTTTCCGTTAACTTACGCACCTGCAGAAATATTTCAGCAAGGAAATTTAGTTGCTATTGAATTAAAATATAGCAATCTCAAACAAATGTGGAAGAAGAGCCAGATGCTAGAGAATCTGAAAGTTCTTAATCTTAGTCATTCCAAGGATTTGACTAAAACCCCAGACTTTTCATACTTGCCTAATCTTGAAAAGCTAGTACTGAAAGATTGTCCAAGTTTGACTGTGGTCTCCCATACCATTGGATATCTCCATAAACTAGTTCTGATAAATCTGAAAGACTGCACAGGTCTTGGGAACCTTCCTAGAAGCATCTATAAATTGAAATCTCTAGAAACTCTGATTCTTTCAGGATGTTCAATGATTGACAAGTTGGAGGAGGATTTGGAACAGATGGAATGTTTGACAACCTTGATTGCAGATAACACTGCTATAACAAAAGTGCCCTTTTCAATAGTAAGATCAAAAAGCATTGGCTATATTTCTTTATGTGGCTTTGAAGGATTTTCTCGTCATGCATTTCCTCATCTCATTTGGTCTTGGATGTCACCAACAAACAATCTCTCATCCCTAGATGTGGGCAATATTTCATCTCTTGTTACAACATTCGATGTCCCAAACACTAATTCCTATACTCTTTCATATACTCTCAAAGACCTTCCAAAGCTTCGAAGTCTTTATGTGAGGTGTGCCTCAGAACTTCAACTAAGTCGAGATGTAGCTAGAATTTTGGATATCTTAAAGGCCACAAATTGGAATACTACTTCTCCCTCAATTGATTGCTGCAGTCAAACTATCGATGGGCCAGGTGGAGATTATTTTTCAATCCCCGGTGATAAGTATTCTGATTGGTTCACCTTCAATTGCAATGGTTCATCCATAACATTTGATGTCCCACAAATGAATGGGCGTAACCTGAAGAGAATGATGTTGCGCATTATCTTTCACTCCTCCTCAGATAATATAACATCACAAGGTTGTCAAAATGTTTTGATCATAAATTACACAAAGACAATCATTCAAGTGTATAAAAGAGATACACTAACCTCTTTTGAGAATGAGGAGTGGCAGAGCATAACATCAAATTTTGAACCTGGTAACAGAGTGGAGGTTATTGTTGTTTGTGGGCAGGGATTCATTGTAGAGAAGACAGCAATATATCTCCTATATGATGAATCAATTAACGAAGAAATAATGGAGCACTGCCATACAACAGATAAGGATGTTATTGTTTATGGTGATGATGATCATATGGCAGCAAATCGGAATGTTACTGTTTCTCGTAGAGATGAAAATGTAAGTGATATAAGTCTAAATTTAAGCCCTTTTTAA | 5037 | 0.3855 | MPSLSCSSRNEESESRSNPNPKWIYDVYLSFCAKDTASFASHLYTTLSKNSGVSVFWDDYDRLGSGDQITPSVHLAIGGSRISIIVFSRNYANSRWCLQELEKIMECRRTIGQMVLPLFCDVHPSDVRGQRGVFGEAFKDLVQRIFLEETWEEEDKFISWVAALSEASKISGHVFMGSRFVGILRLSRKKLSELSDIRKRGSHLCDYSFKKFASIILLVEDFSKTLLRNLHSATATKKFFVAVEEILCNCESYILERKSAVAARIEEKKEAGLVGLRSSISEILLAAVVAVHRFQEAPKFCSGILTVRNENEDIKNIVEHVTHVLDKRDLFVANHPVGVESRVQDVVQLLNNQQSKYPLLLGIWGMAGIGKTTIAKAIYNQIGRHFEDKSFLLNIREVWKQNNGQVSLQERLLFDIYKTMKIKLHTTEAGKMILKERLHHKRILLILDNVNNLEQLNALCGSREWFGLGSKIIITTRDKHLLRMIGVDHVYKVVELEQSESLELFSWHAFKQGCPKEDFVELSQELVAYSGGLPFALEVLGSILFEKVTSEWESMLQKLKRIPNREIQNVLKVSFDDLNDKEKKIFLDIACFFIGMDRDNVIHTLNRSIQFAALQVSFLEDKSLVTIGENNKLGMHVLLRDMAREIIMKESRIKPEPRIYDVFLSFRGEDTRASFTSHLYVALQNEGIYVFRDNDEIQRGEQISVSLLQAIRRSRICVIVLSRNYANSRWCMQELENIMESRRATGLVVVPVFYGVDPSDVRHQTGKFGEAFEDLITSVSMDEYRVRNWRLVLLEVGGIAGFVFIDSRNESADIKNIVEHVTRLLDRTELFVAEHPVGVESRVQVVTKLLNMQQSKDVLLVGIWGMGGIGKTTIAKAIYNQIGSNFEGRSFLPNIREVWDQKDTNRVSLQQLVLYDIFKTTTLKIQNIESGKNILKERLSHKKVLVVLDDVNELDQLNALCGSREWFGPGSRIIITTRDKRLLRLRRVDHVYRMEEMNESESLELFSWHAFKEASPREDFATHSTNVVAYSGRLPLALEVLGSCLFDRGITEWESVLEKLKRIPNDQVQKKLKISYDGLSDDTQKEIFLDIACFFIGMDRNDVIHILNGCGLYPEIGISVLVERSLVTVDNKNKLGMHDLLRDMGREIIREKSPNEPEERSRLWLREDVLDVLSKHKGTKAVKGLSLRLTGKNTICLNTKAFDKLNRLRLLQLAGVRLNGDFKHLAGDLRWLCWRGFPLTYAPAEIFQQGNLVAIELKYSNLKQMWKKSQMLENLKVLNLSHSKDLTKTPDFSYLPNLEKLVLKDCPSLTVVSHTIGYLHKLVLINLKDCTGLGNLPRSIYKLKSLETLILSGCSMIDKLEEDLEQMECLTTLIADNTAITKVPFSIVRSKSIGYISLCGFEGFSRHAFPHLIWSWMSPTNNLSSLDVGNISSLVTTFDVPNTNSYTLSYTLKDLPKLRSLYVRCASELQLSRDVARILDILKATNWNTTSPSIDCCSQTIDGPGGDYFSIPGDKYSDWFTFNCNGSSITFDVPQMNGRNLKRMMLRIIFHSSSDNITSQGCQNVLIINYTKTIIQVYKRDTLTSFENEEWQSITSNFEPGNRVEVIVVCGQGFIVEKTAIYLLYDESINEEIMEHCHTTDKDVIVYGDDDHMAANRNVTVSRRDENVSDISLNLSPF. | 1679 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g08051 | 1678 | ProSiteProfiles | TIR domain profile. | 658 | 796 | IPR000157 | GO:0007165 | |
Seca4g08051 | 1678 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 652 | 802 | IPR035897 | - | |
Seca4g08051 | 1678 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 823 | 1091 | IPR027417 | - | |
Seca4g08051 | 1678 | Gene3D | - | 823 | 990 | IPR027417 | - | |
Seca4g08051 | 1678 | Gene3D | - | 317 | 490 | IPR027417 | - | |
Seca4g08051 | 1678 | Gene3D | Ribonuclease Inhibitor | 1169 | 1490 | IPR032675 | - | |
Seca4g08051 | 1678 | Pfam | TIR domain | 25 | 166 | IPR000157 | GO:0007165 | |
Seca4g08051 | 1678 | Pfam | TIR domain | 660 | 824 | IPR000157 | GO:0007165 | |
Seca4g08051 | 1678 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 326 | 589 | IPR027417 | - | |
Seca4g08051 | 1678 | Gene3D | - | 658 | 822 | IPR035897 | - | |
Seca4g08051 | 1678 | Gene3D | - | 20 | 195 | IPR035897 | - | |
Seca4g08051 | 1678 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 656 | 827 | - | - | |
Seca4g08051 | 1678 | Gene3D | - | 996 | 1080 | IPR042197 | - | |
Seca4g08051 | 1678 | Gene3D | - | 495 | 579 | IPR042197 | - | |
Seca4g08051 | 1678 | SUPERFAMILY | L domain-like | 1137 | 1464 | - | - | |
Seca4g08051 | 1678 | SMART | till_3 | 659 | 799 | IPR000157 | GO:0007165 | |
Seca4g08051 | 1678 | SMART | till_3 | 24 | 170 | IPR000157 | GO:0007165 | |
Seca4g08051 | 1678 | SUPERFAMILY | "Winged helix" DNA-binding domain | 566 | 653 | IPR036390 | - | |
Seca4g08051 | 1678 | PRINTS | Disease resistance protein signature | 1031 | 1045 | - | - | |
Seca4g08051 | 1678 | PRINTS | Disease resistance protein signature | 1270 | 1286 | - | - | |
Seca4g08051 | 1678 | PRINTS | Disease resistance protein signature | 938 | 952 | - | - | |
Seca4g08051 | 1678 | PRINTS | Disease resistance protein signature | 860 | 875 | - | - | |
Seca4g08051 | 1678 | Pfam | NB-ARC domain | 340 | 565 | IPR002182 | GO:0043531 | |
Seca4g08051 | 1678 | Pfam | NB-ARC domain | 843 | 1076 | IPR002182 | GO:0043531 | |
Seca4g08051 | 1678 | ProSiteProfiles | TIR domain profile. | 23 | 168 | IPR000157 | GO:0007165 | |
Seca4g08051 | 1678 | SMART | AAA_5 | 857 | 998 | IPR003593 | GO:0016887 | |
Seca4g08051 | 1678 | SMART | AAA_5 | 357 | 500 | IPR003593 | GO:0016887 | |
Seca4g08051 | 1678 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 16 | 172 | IPR035897 | - | |
Seca4g08051 | 1678 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 660 | 1472 | IPR044974 | GO:0006952 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g08051 | Seca-Chr4 | 188977162 | 189002577 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g08051 | 289 | 658 | WRKY Transcription Factor Family | AT4G12020 | 32.615 | 1.33e-42 | 169 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g08051 | - | - | aprc:113850911 | 1772.67 |