Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07946 TTTCACCATCTCCTATCGGGTTACTCCACTCTCTTTGTTAGGGTTCAGGAAGGTTCTCCGTTTCGAGCTTCCCCGTTGCCTCCGTTGCCTCCGTTGCGAGCCCCAAACGACCTCAAAGCAATTGAGCTCCTCCGTCGTCATCGTTTCGGTGCAGTGGCTGCAGGGTACAGGTTGAGTTCTCGCCTCGGAGGCAGCCGAAACGTCGCGCTAGGAGGCGGCTTCACTCTCGAAGCCACTAACGGCGCTGCCGCTTACGCTCTAAATGCATATACTCTACAAGAATGCTTGAGATTCAAAATGGCAATGGTTGGGATTGATTGGAATGCATTTCTTCATTTTTCTCTGATTTTTCCTTCTCTGTTCGGAGCGTGGCTTGGCACTTATGATACAACGAAAGAGGCTGCTATGGTTTATGACAGAGTAGCTATTGATTTTAGAGGCGTTGATGCTGTTACTAATCTAATAAAACCGCATCAGAAAGAGAAATCTATTCCAAAGTGTGATGAATGTGGTGAAGTTGAATCTGTTATGTTCACATGCTATGTTAGTGTTGCTTAA 558 0.4677 FHHLLSGYSTLFVRVQEGSPFRASPLPPLPPLRAPNDLKAIELLRRHRFGAVAAGYRLSSRLGGSRNVALGGGFTLEATNGAAAYALNAYTLQECLRFKMAMVGIDWNAFLHFSLIFPSLFGAWLGTYDTTKEAAMVYDRVAIDFRGVDAVTNLIKPHQKEKSIPKCDECGEVESVMFTCYVSVA. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07946 185 Gene3D AP2/ERF domain 121 155 IPR036955 GO:0003700|GO:0006355
Seca4g07946 185 ProSiteProfiles AP2/ERF domain profile. 37 155 IPR001471 GO:0003700|GO:0006355
Seca4g07946 185 SUPERFAMILY DNA-binding domain 123 154 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07946 Seca-Chr4 185080793 185082373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07946 124 154 AP2-EREBP Transcription Factor Family AT4G23750 67.742 1.60e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07946 - - lja:Lj0g3v0150929.1 69.3218