Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07938 ATGGCAGAGGAGTTGATTTTGTTGGATGAATGGCTTAGTATGTTTGGTATGAGAGCAAGGATAGCACTGGCTGAAAAAGAGATCAACTATGAGTACAAGGAAGAGGATCTGCTGAATAAGAGCCAACTGCTTACCCAATTCACAAGAAGATCCCAGTTCTCATCTATCAAGGGAAACCCATCTGTTGGTGATGTTGGGGGAAGGATATGGGCTGGAAAGCGAGATGATATTGAAGTGGCAAAGAAGGACTTAATAGAAGGCTTAAAGGAATTGGAGAAGGTTCTTGGGGACCAGCCTTATTTTGGGGGTGACACATTTGGGTTTGTTGACATTGCTCTGATCCCTTTCTATAGCTGGTTTTATACCTATGAGACATTAGGCAACTTCAAAGTGGAGGCAGAGTGTCCTAAGTTGATTGCTTGGGCAAAGAGATGA 435 0.4322 MAEELILLDEWLSMFGMRARIALAEKEINYEYKEEDLLNKSQLLTQFTRRSQFSSIKGNPSVGDVGGRIWAGKRDDIEVAKKDLIEGLKELEKVLGDQPYFGGDTFGFVDIALIPFYSWFYTYETLGNFKVEAECPKLIAWAKR. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07938 144 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 40 144 IPR010987 -
Seca4g07938 144 CDD GST_C_Tau 64 144 IPR045074 GO:0004364|GO:0006749
Seca4g07938 144 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 87 IPR004045 -
Seca4g07938 144 Gene3D Glutaredoxin 1 53 - -
Seca4g07938 144 Gene3D - 56 144 - -
Seca4g07938 144 SUPERFAMILY Thioredoxin-like 4 51 IPR036249 -
Seca4g07938 144 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 69 144 IPR045073 -
Seca4g07938 144 Pfam Glutathione S-transferase, C-terminal domain 80 144 - -
Seca4g07938 144 SUPERFAMILY GST C-terminal domain-like 62 144 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07938 Seca-Chr4 184600663 184601943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07938 1 144 Glutathione S-transferase Gene Family AT1G17180 43.617 3.53e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07938 K00799 - qsu:111999493 167.548