Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07909 ATGGAAACTTCAAATGGTTTATCAAACTTGAGAAACTCTCAACACACAGGAGCACCGCTTCTATTGCCCCCTAAAAGTACATCTGAAGCTGAATTTTTCTCCCATTCAATTGCTGAATTTGAAGGATTCTCAGAGCCCAATGAGGGACTAAGGCGCCACCAACGTACATATTCTGATAGTATGCTGAGTGAGGAAATACCCTCTTGGTTGAATGAACTCCTTGATGAGCCAGACACACCTATATGCAAGAGTCATAGACGATCAGCAAGTGACTCCTTAGCATACTTACAATTTCAAAATTCAGGTGAGGAATCTGAAAGGCATTCAGTTTCTCCACAGGAGTTAGATGCCACGCAATCAGACAAGTTTGAAAAACAGAATGTAGTAGACCCACAAGGCTCCTTTTTGCAACATCGTTGCTTAAATTCCAATCCTTCAGCAAGCAGAACAGAGTCAAAACGTGCCAAAAGGCATTCAGCTCAACAACAGAGGGCCAGGAAAGTGCAATACATTTCTGAACTTGAAAGAAGTATTCAAGCTTTGCAAGCAGAAGGATATGAAGTTTCAGCGGAGCTTGAATTTCTTGATCAGCAACACCTCATATTAGGCATGGAGAATAGGGCCCTCAAACAACGATTGGAAAGTTTATCCCAAGAGCAGTTCATCAAATGCTTGGAGCAGGAAATGCTAGAGAAAGAAATTTCTAGGCTTCGAAATCTTTATCAACAGCAGCATCAGCAACAACAACAAAAGCAGCAACAGAAGCATTATGGTAGGCCTCGATCTAAACGTCAAGATCTTGATTCCTCATTTGCCAAACTTTCTTTGAAGAATAAGGGAACTGAATTGCAGAAAGCCAAATAG 864 0.4132 METSNGLSNLRNSQHTGAPLLLPPKSTSEAEFFSHSIAEFEGFSEPNEGLRRHQRTYSDSMLSEEIPSWLNELLDEPDTPICKSHRRSASDSLAYLQFQNSGEESERHSVSPQELDATQSDKFEKQNVVDPQGSFLQHRCLNSNPSASRTESKRAKRHSAQQQRARKVQYISELERSIQALQAEGYEVSAELEFLDQQHLILGMENRALKQRLESLSQEQFIKCLEQEMLEKEISRLRNLYQQQHQQQQQKQQQKHYGRPRSKRQDLDSSFAKLSLKNKGTELQKAK. 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07909 287 CDD bZIP_plant_RF2 153 199 IPR044759 GO:0003700|GO:0006355
Seca4g07909 287 MobiDBLite consensus disorder prediction 1 21 - -
Seca4g07909 287 SUPERFAMILY Leucine zipper domain 157 202 IPR046347 GO:0003700|GO:0006355
Seca4g07909 287 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 9 114 IPR044797 -
Seca4g07909 287 Coils Coil 227 254 - -
Seca4g07909 287 MobiDBLite consensus disorder prediction 134 149 - -
Seca4g07909 287 Gene3D Classic Zinc Finger 145 199 - -
Seca4g07909 287 MobiDBLite consensus disorder prediction 134 166 - -
Seca4g07909 287 MobiDBLite consensus disorder prediction 99 117 - -
Seca4g07909 287 MobiDBLite consensus disorder prediction 242 287 - -
Seca4g07909 287 MobiDBLite consensus disorder prediction 99 121 - -
Seca4g07909 287 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07909 Seca-Chr4 183207553 183210957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07909 149 223 bZIP Transcription Factor Family AT2G42380 52.000 1.50e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07909 - - lja:Lj0g3v0293819.1 252.677