Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07902 ATGGACGATAACTCTGAACAACCAGGATTGGAAGAAGTAGAGAATGTAACAATAGAGGGATTGCAAGAGATGAGGGTGTGGTCAGAGGAGGAGGAGAATGAAGAAGTAGAAGAAGAAGAGGAGGAGGACAGTTTTGGTTCAGAAGAGGAAGATGATGATGACTATGAGGAAGATGAAGATTATGTTGATAATGTCGAGGAAGGTTGCTGGGAGGAGGTGGGTAGGTGTGTGTTTTCGGACTTGGAGGTTGCATATCAGTTCTATTGTAAATATGCAAGAAGAAAGGGTTTTGTTGTTCGAAAAGGGAAGGTGGTGAAGAACAGTAAAGGGGATATTGTGCAGCAAACACTTTTCTGCAACAGGCAAGGGAGAAGAATAAGTTCTGGTAAAAAAAGTGTGAATTAA 405 0.4173 MDDNSEQPGLEEVENVTIEGLQEMRVWSEEEENEEVEEEEEEDSFGSEEEDDDDYEEDEDYVDNVEEGCWEEVGRCVFSDLEVAYQFYCKYARRKGFVVRKGKVVKNSKGDIVQQTLFCNRQGRRISSGKKSVN. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07902 134 MobiDBLite consensus disorder prediction 28 62 - -
Seca4g07902 134 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 131 - -
Seca4g07902 134 MobiDBLite consensus disorder prediction 1 62 - -
Seca4g07902 134 Pfam FAR1 DNA-binding domain 86 130 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07902 Seca-Chr4 182995588 182998388 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g07902 FAR1 4.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07902 - K17604 tpra:123914620 62.3882