Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07851 ATGGGGGCTAAAAATCATGCAATTGTCATGCCAGATGCAAATGTTGATGCTACTCTAAATGCTTTAGTTGCTGCTGATTTTGGTGCTGCTGAACAAAGGTGCATGGCTCTCAGCACAGTTGTTTTTGTTGGAGGCTCACAATCATGGCTGATAGCTTGGAAGAGGCCAAAAACATTATCAACAAAAACAAGTATGGAAATGGTGCATCTATTTTTACTACATTTGGTATCGCTGCAAGGAAATTTTAGACAGAAATTGAGGCTGGACAGGTTGGCATCAACGTTCCCATTCCAGTTCCTTTGCCCTTTTTCTCATTTACTGGCAACAAGGCATCATTTGCAGGGGATCTCAATTTCTATGGATAATGATAAGAAGGACGAGTCCGCAGAAAATGCAACTACTAATAAGAAGACAGACTCTGATGATTCTGATGAGGAAGAAAATGATAATGAGCAAAAAGAGAAAGGCATCTCAAACAAGAAGAAAAAGGCATTGGTGTCAAAAGAGAAAATTTTTACAGGTGCTAAAAGAGGTATTGAGAAACAACCCTTTCAGCTTCCTGATTTCATTGCTGCCACAGGGATTGAGAAACTCAGAGGATAG 603 0.3997 MGAKNHAIVMPDANVDATLNALVAADFGAAEQRCMALSTVVFVGGSQSWLIAWKRPKTLSTKTSMEMVHLFLLHLVSLQGNFRQKLRLDRLASTFPFQFLCPFSHLLATRHHLQGISISMDNDKKDESAENATTNKKTDSDDSDEEENDNEQKEKGISNKKKKALVSKEKIFTGAKRGIEKQPFQLPDFIAATGIEKLRG. 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07851 200 SUPERFAMILY ALDH-like 1 44 IPR016161 GO:0016491
Seca4g07851 200 Coils Coil 143 163 - -
Seca4g07851 200 Pfam Aldehyde dehydrogenase family 1 41 IPR015590 GO:0016491
Seca4g07851 200 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 3 41 IPR016163 GO:0016620
Seca4g07851 200 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 52 IPR010061 GO:0004491
Seca4g07851 200 MobiDBLite consensus disorder prediction 121 141 - -
Seca4g07851 200 MobiDBLite consensus disorder prediction 121 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07851 Seca-Chr4 181454166 181457153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07851 1 49 Aldehyde Dehydrogenase Gene Family AT2G14170 79.592 5.79e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07851 K00140 - thj:104807185 92.0485