Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07833 ATGGAATCCCAATTAGATGATGGAAATGGAGGGATGGAAGTTTCCGGGGATGTTGGTTTGGGTACATATGAAGTTCAGATACATCAAGAAACATATGAAGTGGATCCAAATGAGGGGTGTAGAGTGCTAGAGAGCTCTTCCGGGGGAGAATTGGGCACTTCTGATGACCATGCTATTCAGGAACCATTTGAAGGCATGGAATTTGAATCTGAAGATGCCGCTAAGATATTCTATGATGAATATGCCCGACATGTAGGATTTGTCATGCGTGTGATGTCTTGTCGGCGCTCAGAAAGAGATGGTAGGATTCTTGCCCGTAGGCTGGGATGTAATAAGGAGGGTTATTGTGTCAGCATCCGGGGGAAATTTGGGTCAATTCGTAAACCAAGGGCCAGCACAAGGGAAGGTTGTAAGGCAATGATTCATATCAAATGTGATAAGTCTGGAAAATGGGTGATAACAAAGTTTGTGAAGGATCATAATCATCCACTAGTAGTCTCTCCACGTGAAGCACGTCAAACAATGGTAAAACTAATAGTACTACTATGA 549 0.4317 MESQLDDGNGGMEVSGDVGLGTYEVQIHQETYEVDPNEGCRVLESSSGGELGTSDDHAIQEPFEGMEFESEDAAKIFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGSIRKPRASTREGCKAMIHIKCDKSGKWVITKFVKDHNHPLVVSPREARQTMVKLIVLL. 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07833 182 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 173 - -
Seca4g07833 182 Pfam FAR1 DNA-binding domain 77 165 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07833 Seca-Chr4 180962142 180970092 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g07833 FAR1 1.9e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07833 - - gmx:100793266 315.849